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The map label for this gene is yiaO [C]

Identifier: 218884404

GI number: 218884404

Start: 1032656

End: 1033759

Strand: Reverse

Name: yiaO [C]

Synonym: DKAM_1093

Alternate gene names: 218884404

Gene position: 1033759-1032656 (Counterclockwise)

Preceding gene: 218884405

Following gene: 218884403

Centisome position: 75.72

GC content: 42.93

Gene sequence:

>1104_bases
ATGATGAGTAGAACCGCAAAAAGTATTTCAACAGCCATGGCTATTATAATAGCTATAGTCCTCGCGATCATAGGTGGAGT
AGCTGGATACTTCATGGGTTCTAGCACAGCCTCAACCGTAACAATCACAGAAACAAAGACTGGAACTGGGGCAACAACCT
CTGAATCACCACAGTACGTATTGCATGTTGCATGGATAACTGCTCCAAGCCCATATGATACTCATACATACTTCTTCTAT
AGGTTCAAAGAGAAGGTTGAGAGTAGAACCAATGGAAAGGTGCAAATAGTCCTGCATCCAGGTGGCGAGCTCGGTGATCA
ATCACAATACCTTGAGCTAATGAAGACAGGAGACTTATTTATGGCTACTATAGAAGTGTCGAGGTTTTCATCCTATACCA
ATGCATTAAACTTTCTAAGCTATCCTGGTCTATTCAGAAGCACGGATGAAGCAATGGCTTTTGCCGAGTCTGATTGGTTA
TTAAACTATAGTAACCAAGTACTTAACCAGTATGGATGGGTTGTTCTAGGTATAACTGTAGGAGGAGCTAGATACTTCTT
ATCGGTGCCGGAGAAGCCGATTACTTCTCTAGACAGTTTCAACGGGCTGAAACTACGTGTGATGGGCTCCCCTGTGTATG
TTGAGGCTGCTCAAGCACTAGGTGCTAATCCGCAGACACTACCATACTCGGAATGTTACACACTGTTGCAAACCAAAGCT
ATAGATGCAATGGAAAATGAGATTGCAGCCATAATAAGTATGAGATTCTACGAGGTGGCCCCTAACATAGCATTAATACC
ATGGGCTTATGCATGGCACTTTGTTGTAGCAAGCAAGAAGATACTTGACAAACTACCATCAGATATAAGGCAGATAATTA
TTGATACCGCCAAGGAGACTTCAAGTGAGAAAAACGCGTGGGGACTATTTGTCGAGCGTGTAACAGGGATTCAGTTCCTT
GTGAGTCATGGTGCGAGAATAATTCAAGTGGACACAAAGCCTATATTTGATAGACTCGAACAGGGATTCTTGAGTAAACA
CTTAAATGAGATCCCGGAAGGGGCTAGACAGTGGTTGCAGAACTATAGGAGTACAACGGGTTAA

Upstream 100 bases:

>100_bases
ATTATGGCTGTCTAGATTCTAGATAGAATATTTATTTAAAACATGTTTTATTTCGCATATATAACGGTATTTATTCTAGA
TATTTTTATCGTGGGGATAG

Downstream 100 bases:

>100_bases
TTTTTAGTTTTTTTAAATGTGTCCTCTGATTATGAAGGTGAAGCCGGTATGAATTACAGTGGAATGAATACGTTTATAGC
TAAGCTATTAAGAGCGATCA

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MMSRTAKSISTAMAIIIAIVLAIIGGVAGYFMGSSTASTVTITETKTGTGATTSESPQYVLHVAWITAPSPYDTHTYFFY
RFKEKVESRTNGKVQIVLHPGGELGDQSQYLELMKTGDLFMATIEVSRFSSYTNALNFLSYPGLFRSTDEAMAFAESDWL
LNYSNQVLNQYGWVVLGITVGGARYFLSVPEKPITSLDSFNGLKLRVMGSPVYVEAAQALGANPQTLPYSECYTLLQTKA
IDAMENEIAAIISMRFYEVAPNIALIPWAYAWHFVVASKKILDKLPSDIRQIIIDTAKETSSEKNAWGLFVERVTGIQFL
VSHGARIIQVDTKPIFDRLEQGFLSKHLNEIPEGARQWLQNYRSTTG

Sequences:

>Translated_367_residues
MMSRTAKSISTAMAIIIAIVLAIIGGVAGYFMGSSTASTVTITETKTGTGATTSESPQYVLHVAWITAPSPYDTHTYFFY
RFKEKVESRTNGKVQIVLHPGGELGDQSQYLELMKTGDLFMATIEVSRFSSYTNALNFLSYPGLFRSTDEAMAFAESDWL
LNYSNQVLNQYGWVVLGITVGGARYFLSVPEKPITSLDSFNGLKLRVMGSPVYVEAAQALGANPQTLPYSECYTLLQTKA
IDAMENEIAAIISMRFYEVAPNIALIPWAYAWHFVVASKKILDKLPSDIRQIIIDTAKETSSEKNAWGLFVERVTGIQFL
VSHGARIIQVDTKPIFDRLEQGFLSKHLNEIPEGARQWLQNYRSTTG
>Mature_367_residues
MMSRTAKSISTAMAIIIAIVLAIIGGVAGYFMGSSTASTVTITETKTGTGATTSESPQYVLHVAWITAPSPYDTHTYFFY
RFKEKVESRTNGKVQIVLHPGGELGDQSQYLELMKTGDLFMATIEVSRFSSYTNALNFLSYPGLFRSTDEAMAFAESDWL
LNYSNQVLNQYGWVVLGITVGGARYFLSVPEKPITSLDSFNGLKLRVMGSPVYVEAAQALGANPQTLPYSECYTLLQTKA
IDAMENEIAAIISMRFYEVAPNIALIPWAYAWHFVVASKKILDKLPSDIRQIIIDTAKETSSEKNAWGLFVERVTGIQFL
VSHGARIIQVDTKPIFDRLEQGFLSKHLNEIPEGARQWLQNYRSTTG

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=287, Percent_Identity=26.1324041811847, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 40701; Mature: 40701

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRTAKSISTAMAIIIAIVLAIIGGVAGYFMGSSTASTVTITETKTGTGATTSESPQYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEE
LHVAWITAPSPYDTHTYFFYRFKEKVESRTNGKVQIVLHPGGELGDQSQYLELMKTGDLF
EEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEE
MATIEVSRFSSYTNALNFLSYPGLFRSTDEAMAFAESDWLLNYSNQVLNQYGWVVLGITV
EEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHCCCEEEEEEE
GGARYFLSVPEKPITSLDSFNGLKLRVMGSPVYVEAAQALGANPQTLPYSECYTLLQTKA
CCEEEEEECCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IDAMENEIAAIISMRFYEVAPNIALIPWAYAWHFVVASKKILDKLPSDIRQIIIDTAKET
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
SSEKNAWGLFVERVTGIQFLVSHGARIIQVDTKPIFDRLEQGFLSKHLNEIPEGARQWLQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYRSTTG
HHHCCCC
>Mature Secondary Structure
MMSRTAKSISTAMAIIIAIVLAIIGGVAGYFMGSSTASTVTITETKTGTGATTSESPQYV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEE
LHVAWITAPSPYDTHTYFFYRFKEKVESRTNGKVQIVLHPGGELGDQSQYLELMKTGDLF
EEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCEE
MATIEVSRFSSYTNALNFLSYPGLFRSTDEAMAFAESDWLLNYSNQVLNQYGWVVLGITV
EEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEECHHHHHHHHCCCEEEEEEE
GGARYFLSVPEKPITSLDSFNGLKLRVMGSPVYVEAAQALGANPQTLPYSECYTLLQTKA
CCEEEEEECCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IDAMENEIAAIISMRFYEVAPNIALIPWAYAWHFVVASKKILDKLPSDIRQIIIDTAKET
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
SSEKNAWGLFVERVTGIQFLVSHGARIIQVDTKPIFDRLEQGFLSKHLNEIPEGARQWLQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NYRSTTG
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]