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The map label for this gene is 218884292

Identifier: 218884292

GI number: 218884292

Start: 930968

End: 931612

Strand: Reverse

Name: 218884292

Synonym: DKAM_0981

Alternate gene names: NA

Gene position: 931612-930968 (Counterclockwise)

Preceding gene: 218884293

Following gene: 218884290

Centisome position: 68.24

GC content: 40.78

Gene sequence:

>645_bases
ATGGTGGAGGGGTTGGAGATGTATAAAGCGGCCACGGTTATTACAGAAGCTCTTTACAGGCGTGTAGTGGGAGAACAAGT
CGAGAAGATGAGTGAACTGAGGAATACTGATATAATATATGTAACAGACCTAGTTGCTTGCAGCCATAAGTATCACTTAA
GAAGAAAATATCCGGAGCTCACGATCAGCTTCGAGCCATCCTCTGTGCTCGGGATCCTTCTACATAAGGGATTAGAGGAA
GTACTTATGAGTGAGGGATATGAGGTTGAGAAAAGCATAGAGACATATGTAGAGATAGGGAGTAAAAGGTATATTATTAA
AGGGAGGCTCGATGCCTATAACCCAAATACTAGAGTAGTTGTTGAGATAAAAAGTTCCAGGTCTTCGAAGGATCTTCCAA
GAGGGCACCATGTGGAGCAGTTAAACATTTATCTAAACATGTTGAATGCGGAATCAGGCATCCTAGTCTATATAACACCC
GATAAAATAGTAGAGTATAGTATTCAGCGTGAGAAAATAGATCTGAAGAATCTTGTGAAGAACGTAGTGAACGACATTGT
TCACCCACGTTATTCATGGGAGTGTAATTACTGCATATTTAAGAAGATATGTACATACTATGTGGAGGAGCAGAAACCCC
AGTGA

Upstream 100 bases:

>100_bases
GAAGAATAACGTCCAGTAATCAGCCTTAACAGAGATACTCAACAATACTGGTGTTCGTAGAAATATTAATATAAAATTGA
GGGGGAATTCTGAAAACACT

Downstream 100 bases:

>100_bases
TGAACTCGGGAAGACTGAGCATAGCAATGAGGATGGTCTTGAGTACTGAGTTCTTTACTGATTATGAGTGTATGTATTCC
TTTAAAGCCAGCGTGAATAA

Product: CRISPR-associated protein Cas4

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVEGLEMYKAATVITEALYRRVVGEQVEKMSELRNTDIIYVTDLVACSHKYHLRRKYPELTISFEPSSVLGILLHKGLEE
VLMSEGYEVEKSIETYVEIGSKRYIIKGRLDAYNPNTRVVVEIKSSRSSKDLPRGHHVEQLNIYLNMLNAESGILVYITP
DKIVEYSIQREKIDLKNLVKNVVNDIVHPRYSWECNYCIFKKICTYYVEEQKPQ

Sequences:

>Translated_214_residues
MVEGLEMYKAATVITEALYRRVVGEQVEKMSELRNTDIIYVTDLVACSHKYHLRRKYPELTISFEPSSVLGILLHKGLEE
VLMSEGYEVEKSIETYVEIGSKRYIIKGRLDAYNPNTRVVVEIKSSRSSKDLPRGHHVEQLNIYLNMLNAESGILVYITP
DKIVEYSIQREKIDLKNLVKNVVNDIVHPRYSWECNYCIFKKICTYYVEEQKPQ
>Mature_214_residues
MVEGLEMYKAATVITEALYRRVVGEQVEKMSELRNTDIIYVTDLVACSHKYHLRRKYPELTISFEPSSVLGILLHKGLEE
VLMSEGYEVEKSIETYVEIGSKRYIIKGRLDAYNPNTRVVVEIKSSRSSKDLPRGHHVEQLNIYLNMLNAESGILVYITP
DKIVEYSIQREKIDLKNLVKNVVNDIVHPRYSWECNYCIFKKICTYYVEEQKPQ

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24928; Mature: 24928

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGLEMYKAATVITEALYRRVVGEQVEKMSELRNTDIIYVTDLVACSHKYHLRRKYPEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCE
TISFEPSSVLGILLHKGLEEVLMSEGYEVEKSIETYVEIGSKRYIIKGRLDAYNPNTRVV
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEE
VEIKSSRSSKDLPRGHHVEQLNIYLNMLNAESGILVYITPDKIVEYSIQREKIDLKNLVK
EEECCCCCCCCCCCCCCHHEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCHHHHHH
NVVNDIVHPRYSWECNYCIFKKICTYYVEEQKPQ
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVEGLEMYKAATVITEALYRRVVGEQVEKMSELRNTDIIYVTDLVACSHKYHLRRKYPEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCE
TISFEPSSVLGILLHKGLEEVLMSEGYEVEKSIETYVEIGSKRYIIKGRLDAYNPNTRVV
EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEE
VEIKSSRSSKDLPRGHHVEQLNIYLNMLNAESGILVYITPDKIVEYSIQREKIDLKNLVK
EEECCCCCCCCCCCCCCHHEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCHHHHHH
NVVNDIVHPRYSWECNYCIFKKICTYYVEEQKPQ
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA