| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884274
Identifier: 218884274
GI number: 218884274
Start: 912341
End: 912874
Strand: Reverse
Name: 218884274
Synonym: DKAM_0963
Alternate gene names: NA
Gene position: 912874-912341 (Counterclockwise)
Preceding gene: 218884275
Following gene: 218884273
Centisome position: 66.87
GC content: 43.26
Gene sequence:
>534_bases GTGAGGGGTATGATGACTAGGTACCTACCCCTAGCCTCGGTAATAATACCTCTTATATGCATACTTGCCTCGATGGCGTA CTCTCCATGGTTCAATATATTTGGCAACGCTCTCAGTGATCTAGGGCACGCAGTTAAAAGCAGTGTAGCCCCCTTGTTTA ATATAGGACTCGTATTCGGAGGGCTTTCAGCATATACTACAGCCATTGTGTCACAGCGTATAGATAAACACTACAATATG GCGCTCATGTATACAGGTGTCTCATTGATCCTAGTCGGAGTATTTGATGAGGTATATGGCTTGCTCCACTTTATTGTATC AGTCTTATTCTTCATTGGGATAGCGTTGTTTCTGTTGCTAGCAAACTTGAAGGAGAAGATGAAGATTGTTAAACTATACT CGGCGATGGCACTAGTTGTAATAATAATGGTTTGGGCTATTCACTTCACATATAGGGTGCCGAGGGGAGCGGCTATACCA GAGATTACCTCTGTCGCGTTATTCGCCCCAGTCTACCTCTATATATATTGGTAA
Upstream 100 bases:
>100_bases TTGAAAGCATAGATCTCGCCTACAATGCTCTTGGGCTACTCGCTTGGACAATAGTGATATTTATCTTAGCATACAAGCTA TATATTAGAAACCTGGTTGG
Downstream 100 bases:
>100_bases GTGGCATCTTTGAATCTCTGAAATAGTTTTAAACCTTAAATAGTACTCATATAGGAATAGGAATAGGTGATTACATATGT CAGAGAAGAAGAAGCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRGMMTRYLPLASVIIPLICILASMAYSPWFNIFGNALSDLGHAVKSSVAPLFNIGLVFGGLSAYTTAIVSQRIDKHYNM ALMYTGVSLILVGVFDEVYGLLHFIVSVLFFIGIALFLLLANLKEKMKIVKLYSAMALVVIIMVWAIHFTYRVPRGAAIP EITSVALFAPVYLYIYW
Sequences:
>Translated_177_residues MRGMMTRYLPLASVIIPLICILASMAYSPWFNIFGNALSDLGHAVKSSVAPLFNIGLVFGGLSAYTTAIVSQRIDKHYNM ALMYTGVSLILVGVFDEVYGLLHFIVSVLFFIGIALFLLLANLKEKMKIVKLYSAMALVVIIMVWAIHFTYRVPRGAAIP EITSVALFAPVYLYIYW >Mature_177_residues MRGMMTRYLPLASVIIPLICILASMAYSPWFNIFGNALSDLGHAVKSSVAPLFNIGLVFGGLSAYTTAIVSQRIDKHYNM ALMYTGVSLILVGVFDEVYGLLHFIVSVLFFIGIALFLLLANLKEKMKIVKLYSAMALVVIIMVWAIHFTYRVPRGAAIP EITSVALFAPVYLYIYW
Specific function: Unknown
COG id: COG3371
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19693; Mature: 19693
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGMMTRYLPLASVIIPLICILASMAYSPWFNIFGNALSDLGHAVKSSVAPLFNIGLVFG CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSAYTTAIVSQRIDKHYNMALMYTGVSLILVGVFDEVYGLLHFIVSVLFFIGIALFLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLKEKMKIVKLYSAMALVVIIMVWAIHFTYRVPRGAAIPEITSVALFAPVYLYIYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGMMTRYLPLASVIIPLICILASMAYSPWFNIFGNALSDLGHAVKSSVAPLFNIGLVFG CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLSAYTTAIVSQRIDKHYNMALMYTGVSLILVGVFDEVYGLLHFIVSVLFFIGIALFLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLKEKMKIVKLYSAMALVVIIMVWAIHFTYRVPRGAAIPEITSVALFAPVYLYIYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA