| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884247
Identifier: 218884247
GI number: 218884247
Start: 889539
End: 890588
Strand: Reverse
Name: 218884247
Synonym: DKAM_0936
Alternate gene names: NA
Gene position: 890588-889539 (Counterclockwise)
Preceding gene: 218884248
Following gene: 218884246
Centisome position: 65.23
GC content: 42.0
Gene sequence:
>1050_bases GTGGTGGTGGACTACATGGTGGGTACTGAGAGAAGAAGGGTGCAAAAAACCGGGTCTTCATCATATATAATAACTCTACC TAAGGAATGGGTTGACGCAGTGGGGTTGAAGAGCGGTGACTACGTAAGCGTGGAGAAATATGGCGATAAACTGGTGATAA TACCTCCTTCAACAGAAGCGGTTCAAGTAAAGTCCACTATTAAGGTTAGCCCCGAGGTAACCGTGGACCAGGTATTTAGG ATGCTCTTAGCGATGTACCTTTCAGGATATAGTACTATAGTTGTGGCATTCGATTCCAGAATACCTGATCCAGCCAGGTT TATCAGTGAAGTAAAGAATATGGCTAGGATAAAGCTGGCGGGTGTTGAAGTAGTCGAGGAGTCATATAACAGTGTGACAT TCAAGATTCTCCTGAATATCAAGGAGCTCCCACTATTAAGTGCTGTGAGGAGGCTCCACTTAATAGTCAACAACATGATC GAGGATGCGAAGACATTATTGAAAACAATGGATGGGAACGTGGCCTACGCTATAATACAGAGGGATGATGAAGCCGATAG ATTCCACCATATGATTGTGAGAGAATTAAGCATGGCACTACTCGATGTAAGGATACAGCATGAGCTAGGAATAAGTAGCA TTGTGGAAGCATTAAGCTATAGGATTATAGCGAGAAACCTGGAGAGAATAGCGGATCACATCGTTAACATAGCTAGAAGA ATACTGGCCATGAAGAAGACTAGTGGGGCAGATATAGTGTATGAACTAATGGTGAAGGCATCAGACCTCTTCAATAAGGC CATGGGGTCACTATATAGTTTAAGCAGAAGGGATGCCGAAGAAGTAATTCAAACCGCCCGTGTACTAGTAGATGAAATAG AGAAAACAATATATGAGAAAATAATAAACTCAACGCTTCCAGATAACGAGAAAGCCGGGCTTACACTAATATGTGACAGT CTTAGAAGAATCGTGAGGTATTCTAATGGAATAGCTGAGTCAGTATTAAATATAAAGGCAGCTAAAAACCCATCCGTTGA GGTAAAATAA
Upstream 100 bases:
>100_bases TCGGATTCCATATTCTTTTACCTACTTGATAGTAAAGTATATATAAGTCTGTAATAATTGATCTTAAAATTAATAGACAC ATATAATTGGTTAAACTAAA
Downstream 100 bases:
>100_bases TACTCCCCAACCCAACTCTCCACCCGGGTCTAATCTTTTTAACCACATCCTTCCCTATGCTAGGGGAAAGAGTCCTTGAA CCTTGAAGGGCATTGTGGAT
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: Transcription Regulator; Phosphate Uptake Regulator; Phosphate Regulatory Protein; Transport System Regulatory Protein; SpoVT/AbrB Domain Protein; ABC Transporter; Regulatory Protein; Phosphate Regulatory Protein-Like; SpoVT/AbrB Domain-Containing Protein; ABC Transport System Regulatory Protein; Phosphate Transport System Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS LRRIVRYSNGIAESVLNIKAAKNPSVEVK
Sequences:
>Translated_349_residues MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS LRRIVRYSNGIAESVLNIKAAKNPSVEVK >Mature_349_residues MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS LRRIVRYSNGIAESVLNIKAAKNPSVEVK
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39203; Mature: 39203
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEA CEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEHEECCCEEEEECCCCCC VQVKSTIKVSPEVTVDQVFRMLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLA EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMIEDAKTLLKTMDGNVAYAIIQ HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE RDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IINSTLPDNEKAGLTLICDSLRRIVRYSNGIAESVLNIKAAKNPSVEVK HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEA CEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEHEECCCEEEEECCCCCC VQVKSTIKVSPEVTVDQVFRMLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLA EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH GVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMIEDAKTLLKTMDGNVAYAIIQ HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE RDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH IINSTLPDNEKAGLTLICDSLRRIVRYSNGIAESVLNIKAAKNPSVEVK HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA