Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884247

Identifier: 218884247

GI number: 218884247

Start: 889539

End: 890588

Strand: Reverse

Name: 218884247

Synonym: DKAM_0936

Alternate gene names: NA

Gene position: 890588-889539 (Counterclockwise)

Preceding gene: 218884248

Following gene: 218884246

Centisome position: 65.23

GC content: 42.0

Gene sequence:

>1050_bases
GTGGTGGTGGACTACATGGTGGGTACTGAGAGAAGAAGGGTGCAAAAAACCGGGTCTTCATCATATATAATAACTCTACC
TAAGGAATGGGTTGACGCAGTGGGGTTGAAGAGCGGTGACTACGTAAGCGTGGAGAAATATGGCGATAAACTGGTGATAA
TACCTCCTTCAACAGAAGCGGTTCAAGTAAAGTCCACTATTAAGGTTAGCCCCGAGGTAACCGTGGACCAGGTATTTAGG
ATGCTCTTAGCGATGTACCTTTCAGGATATAGTACTATAGTTGTGGCATTCGATTCCAGAATACCTGATCCAGCCAGGTT
TATCAGTGAAGTAAAGAATATGGCTAGGATAAAGCTGGCGGGTGTTGAAGTAGTCGAGGAGTCATATAACAGTGTGACAT
TCAAGATTCTCCTGAATATCAAGGAGCTCCCACTATTAAGTGCTGTGAGGAGGCTCCACTTAATAGTCAACAACATGATC
GAGGATGCGAAGACATTATTGAAAACAATGGATGGGAACGTGGCCTACGCTATAATACAGAGGGATGATGAAGCCGATAG
ATTCCACCATATGATTGTGAGAGAATTAAGCATGGCACTACTCGATGTAAGGATACAGCATGAGCTAGGAATAAGTAGCA
TTGTGGAAGCATTAAGCTATAGGATTATAGCGAGAAACCTGGAGAGAATAGCGGATCACATCGTTAACATAGCTAGAAGA
ATACTGGCCATGAAGAAGACTAGTGGGGCAGATATAGTGTATGAACTAATGGTGAAGGCATCAGACCTCTTCAATAAGGC
CATGGGGTCACTATATAGTTTAAGCAGAAGGGATGCCGAAGAAGTAATTCAAACCGCCCGTGTACTAGTAGATGAAATAG
AGAAAACAATATATGAGAAAATAATAAACTCAACGCTTCCAGATAACGAGAAAGCCGGGCTTACACTAATATGTGACAGT
CTTAGAAGAATCGTGAGGTATTCTAATGGAATAGCTGAGTCAGTATTAAATATAAAGGCAGCTAAAAACCCATCCGTTGA
GGTAAAATAA

Upstream 100 bases:

>100_bases
TCGGATTCCATATTCTTTTACCTACTTGATAGTAAAGTATATATAAGTCTGTAATAATTGATCTTAAAATTAATAGACAC
ATATAATTGGTTAAACTAAA

Downstream 100 bases:

>100_bases
TACTCCCCAACCCAACTCTCCACCCGGGTCTAATCTTTTTAACCACATCCTTCCCTATGCTAGGGGAAAGAGTCCTTGAA
CCTTGAAGGGCATTGTGGAT

Product: phosphate uptake regulator PhoU

Products: NA

Alternate protein names: Transcription Regulator; Phosphate Uptake Regulator; Phosphate Regulatory Protein; Transport System Regulatory Protein; SpoVT/AbrB Domain Protein; ABC Transporter; Regulatory Protein; Phosphate Regulatory Protein-Like; SpoVT/AbrB Domain-Containing Protein; ABC Transport System Regulatory Protein; Phosphate Transport System Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR
MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI
EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR
ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS
LRRIVRYSNGIAESVLNIKAAKNPSVEVK

Sequences:

>Translated_349_residues
MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR
MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI
EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR
ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS
LRRIVRYSNGIAESVLNIKAAKNPSVEVK
>Mature_349_residues
MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEAVQVKSTIKVSPEVTVDQVFR
MLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLAGVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMI
EDAKTLLKTMDGNVAYAIIQRDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR
ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEKIINSTLPDNEKAGLTLICDS
LRRIVRYSNGIAESVLNIKAAKNPSVEVK

Specific function: Unknown

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39203; Mature: 39203

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEA
CEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEHEECCCEEEEECCCCCC
VQVKSTIKVSPEVTVDQVFRMLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLA
EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
GVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMIEDAKTLLKTMDGNVAYAIIQ
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
RDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IINSTLPDNEKAGLTLICDSLRRIVRYSNGIAESVLNIKAAKNPSVEVK
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVVDYMVGTERRRVQKTGSSSYIITLPKEWVDAVGLKSGDYVSVEKYGDKLVIIPPSTEA
CEEEEECCCHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEHEECCCEEEEECCCCCC
VQVKSTIKVSPEVTVDQVFRMLLAMYLSGYSTIVVAFDSRIPDPARFISEVKNMARIKLA
EEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
GVEVVEESYNSVTFKILLNIKELPLLSAVRRLHLIVNNMIEDAKTLLKTMDGNVAYAIIQ
HHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
RDDEADRFHHMIVRELSMALLDVRIQHELGISSIVEALSYRIIARNLERIADHIVNIARR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILAMKKTSGADIVYELMVKASDLFNKAMGSLYSLSRRDAEEVIQTARVLVDEIEKTIYEK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IINSTLPDNEKAGLTLICDSLRRIVRYSNGIAESVLNIKAAKNPSVEVK
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA