Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884243

Identifier: 218884243

GI number: 218884243

Start: 885280

End: 885972

Strand: Reverse

Name: 218884243

Synonym: DKAM_0932

Alternate gene names: NA

Gene position: 885972-885280 (Counterclockwise)

Preceding gene: 218884246

Following gene: 218884241

Centisome position: 64.9

GC content: 43.87

Gene sequence:

>693_bases
ATGCCGGGTCTAACAGTTGAGAAAATCGATGAATACCTTGGTAAGCCCGTGAATGATCCATACGGGAGACGAGTGGGATA
CATAGTGGGATTCTACAGTGACTCAGATGGTAACATTTCATCCCTAGAGGTAAGCTTCAACGACTTTGATTTTAAGCAGG
TTGAAATAGAGAGGTTCAGGTTCGAGAACGGTAATATAATTCTGCTACCTGAATGGGAATACATGGCCACAGTACTCGAG
AACAGGTTGGAGAGGGTTAAGAAGCGTGCTGCAGCCCTTGAGGAATTAAACAGTAGGAAGGAGATACCGAAGCACACCTA
TGAGGAATTCAAGAAGAAACTAGAGGAGTCTCTAATAAAGCTTAAGGAGGACTCGAAAAACGTTAAGGAGGTACTCAGGA
AGAGAATGCATGAAATAGAGGACATGATAGTTGAGCTGGAGAAAACTGTAACGGCTGTAAAGGTAAGCTATATAGGTGGT
GAAATACCGGAGAAAGCATATAAGGCATCCATGGATCACCTCAGGAGAAACCTGGATATCTTGAGCTCCGAGAAAGCCAG
TGTTAAAAACCACCTTGATAGAATAGAGGCGTTGGAGAATCTACCAGTGGATACAGCAGTTAAGGTTAGCGTTGCTGTTG
AGACACCGTCTAAATCACAGCAACCGATACCAGTTGTGGTTGTTGAGTCTTAG

Upstream 100 bases:

>100_bases
GATGCGGGGAACCAGTGAACCACCCTTCAGGGCGGGGGAGGTCAATTTAGACCCTTGGTTTTTAAATCATTGCAACTGGA
TAGTTTACCAGGTGTATTGT

Downstream 100 bases:

>100_bases
CGGTGTTTTAAGCAGTATTTAGCATAAGAAAAACATTGCTTCGACACTATATTCCGAAAACATATTTTAATAGCACGCTT
ACCAAGGCAGATACTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPGLTVEKIDEYLGKPVNDPYGRRVGYIVGFYSDSDGNISSLEVSFNDFDFKQVEIERFRFENGNIILLPEWEYMATVLE
NRLERVKKRAAALEELNSRKEIPKHTYEEFKKKLEESLIKLKEDSKNVKEVLRKRMHEIEDMIVELEKTVTAVKVSYIGG
EIPEKAYKASMDHLRRNLDILSSEKASVKNHLDRIEALENLPVDTAVKVSVAVETPSKSQQPIPVVVVES

Sequences:

>Translated_230_residues
MPGLTVEKIDEYLGKPVNDPYGRRVGYIVGFYSDSDGNISSLEVSFNDFDFKQVEIERFRFENGNIILLPEWEYMATVLE
NRLERVKKRAAALEELNSRKEIPKHTYEEFKKKLEESLIKLKEDSKNVKEVLRKRMHEIEDMIVELEKTVTAVKVSYIGG
EIPEKAYKASMDHLRRNLDILSSEKASVKNHLDRIEALENLPVDTAVKVSVAVETPSKSQQPIPVVVVES
>Mature_229_residues
PGLTVEKIDEYLGKPVNDPYGRRVGYIVGFYSDSDGNISSLEVSFNDFDFKQVEIERFRFENGNIILLPEWEYMATVLEN
RLERVKKRAAALEELNSRKEIPKHTYEEFKKKLEESLIKLKEDSKNVKEVLRKRMHEIEDMIVELEKTVTAVKVSYIGGE
IPEKAYKASMDHLRRNLDILSSEKASVKNHLDRIEALENLPVDTAVKVSVAVETPSKSQQPIPVVVVES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26412; Mature: 26280

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLTVEKIDEYLGKPVNDPYGRRVGYIVGFYSDSDGNISSLEVSFNDFDFKQVEIERFR
CCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHEE
FENGNIILLPEWEYMATVLENRLERVKKRAAALEELNSRKEIPKHTYEEFKKKLEESLIK
ECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEDSKNVKEVLRKRMHEIEDMIVELEKTVTAVKVSYIGGEIPEKAYKASMDHLRRNLDI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSSEKASVKNHLDRIEALENLPVDTAVKVSVAVETPSKSQQPIPVVVVES
HCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
PGLTVEKIDEYLGKPVNDPYGRRVGYIVGFYSDSDGNISSLEVSFNDFDFKQVEIERFR
CCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHEE
FENGNIILLPEWEYMATVLENRLERVKKRAAALEELNSRKEIPKHTYEEFKKKLEESLIK
ECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEDSKNVKEVLRKRMHEIEDMIVELEKTVTAVKVSYIGGEIPEKAYKASMDHLRRNLDI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSSEKASVKNHLDRIEALENLPVDTAVKVSVAVETPSKSQQPIPVVVVES
HCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA