| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is ywrA [H]
Identifier: 218884242
GI number: 218884242
Start: 884670
End: 885233
Strand: Direct
Name: ywrA [H]
Synonym: DKAM_0931
Alternate gene names: 218884242
Gene position: 884670-885233 (Clockwise)
Preceding gene: 218884238
Following gene: 218884244
Centisome position: 64.8
GC content: 42.55
Gene sequence:
>564_bases GTGGGTAATGTGACTTTACTGGAGTTATTCCTAGAGTTCCTGAAGATAGGCTTCTTCATGTTTGGAGGCGGATACGGTGG TATAGCTTTAATGTATAAGGAGCTCGTTGAAATAAAGGGTTGGGTGTCTGATGAAGAGTTCACCAGCCTCCTAGGAATAG CTGAGAGCACGCCGGGTCCCATAGCAATAAATTCAGCCACATGGATAGGGTACTCCCTGGGAGGTCTACCGGGCTCTATT CTCGCTACAATGGGTGTTGTATTACCAGCATATCTGGTGATACTTACTGTAGTTACATCTCTCAGACCCTACATGAGTAA TGATGTTGTTAGGATAGTGTTTAGAGGTATTAATGCGGCTGTGGTAGCATTAATACTGTATGCATTTATAAAAGTGGCTA AATCCACCCTACTGACTTCAGCAGGATTTAGCCTAAATCTGATAGCCTTCACAATCTTCATAGCGGCGTTCATACTACTG TATATCGGGAACCAGCACCCAATAATAGTGATAATAGTATCTGCCTTGGTAAGCGTGCTATTAAAATATGTTTTCGGAAT ATAG
Upstream 100 bases:
>100_bases ATTGGGACGCCCCCTGCTAATATAATCTTTCTACCTAGATTAAATGCGGTCAAGGTATAAATACTGTATTCAAAGTAAAT ACTGAAAACAGGTGGGAACT
Downstream 100 bases:
>100_bases TGTCGAAGCAATGTTTTTCTTATGCTAAATACTGCTTAAAACACCGCTAAGACTCAACAACCACAACTGGTATCGGTTGC TGTGATTTAGACGGTGTCTC
Product: Chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MGNVTLLELFLEFLKIGFFMFGGGYGGIALMYKELVEIKGWVSDEEFTSLLGIAESTPGPIAINSATWIGYSLGGLPGSI LATMGVVLPAYLVILTVVTSLRPYMSNDVVRIVFRGINAAVVALILYAFIKVAKSTLLTSAGFSLNLIAFTIFIAAFILL YIGNQHPIIVIIVSALVSVLLKYVFGI
Sequences:
>Translated_187_residues MGNVTLLELFLEFLKIGFFMFGGGYGGIALMYKELVEIKGWVSDEEFTSLLGIAESTPGPIAINSATWIGYSLGGLPGSI LATMGVVLPAYLVILTVVTSLRPYMSNDVVRIVFRGINAAVVALILYAFIKVAKSTLLTSAGFSLNLIAFTIFIAAFILL YIGNQHPIIVIIVSALVSVLLKYVFGI >Mature_186_residues GNVTLLELFLEFLKIGFFMFGGGYGGIALMYKELVEIKGWVSDEEFTSLLGIAESTPGPIAINSATWIGYSLGGLPGSIL ATMGVVLPAYLVILTVVTSLRPYMSNDVVRIVFRGINAAVVALILYAFIKVAKSTLLTSAGFSLNLIAFTIFIAAFILLY IGNQHPIIVIIVSALVSVLLKYVFGI
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20075; Mature: 19944
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVTLLELFLEFLKIGFFMFGGGYGGIALMYKELVEIKGWVSDEEFTSLLGIAESTPGP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC IAINSATWIGYSLGGLPGSILATMGVVLPAYLVILTVVTSLRPYMSNDVVRIVFRGINAA EEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVALILYAFIKVAKSTLLTSAGFSLNLIAFTIFIAAFILLYIGNQHPIIVIIVSALVSVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LKYVFGI HHHHHCC >Mature Secondary Structure GNVTLLELFLEFLKIGFFMFGGGYGGIALMYKELVEIKGWVSDEEFTSLLGIAESTPGP CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC IAINSATWIGYSLGGLPGSILATMGVVLPAYLVILTVVTSLRPYMSNDVVRIVFRGINAA EEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVALILYAFIKVAKSTLLTSAGFSLNLIAFTIFIAAFILLYIGNQHPIIVIIVSALVSVL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LKYVFGI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]