| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884223
Identifier: 218884223
GI number: 218884223
Start: 866524
End: 867378
Strand: Reverse
Name: 218884223
Synonym: DKAM_0912
Alternate gene names: NA
Gene position: 867378-866524 (Counterclockwise)
Preceding gene: 218884224
Following gene: 218884222
Centisome position: 63.53
GC content: 40.58
Gene sequence:
>855_bases ATGCATACTTACCTGGTTTTAAGGCTTAGGAAGAAATGTGCTAGGAATTTCTTAGTATTCCTAGTATTGATTCTACTTGT TTCGACATATGTGCTTGACACCTCGCAGCCTAAGCTGGTGGTTTCAACATATGACTTACTAGTGGATCAAAAATACAGTG ATGTATTCTTACTAGTGGATGCAAACGGATACATCACTCCTCCAGGTCCATTCACTGTAAGGCAGAATGAAACAGTAGTT GTTAAACTACTCGTCGGCAACTTATCCCTTCCAATAAGCGAGTTATTGAACACTAATGGGACAGACCTATATGTTATAGA TAATCAAACCAGTATATTTTTACCCTGGAAGAGAATAGAGAACCTCACGCTTGTAACGGATATAAGATTAGACCTCGGGA TAAAACCCTACTCTCCATACCCACCAGCGTTTATCACGCTACTTGAACCAGGCCACTGGCTAGTGAACTTTCAATCCCCC TACCTATTTAACGTGTCAATCAACCTCTATATTTTACCCGTGGACCCAGTTGTAGAAATACATAATAATGGATGGGGAAC GTGTAAAACCTATATAAAGATATATGGAGCGAGTACATTCATCAACACGATAAGCATCCGCGTTGATCCCAGGTCCAGCA GGACCATAAAGATAAATGGGACAGGGCAACCGGTAGTAGTGAATAGCGAGGTTTTATGGGGTCCCATGGTCTTCTCAATA GAGGATGGAAAACTAATTATGAATCTTCAATCATATATAATTCCAATACTCACTCTAGAGACTCTCATCACGGCTATAGT AATGTTCACTGTATGCAGGAAGAAACAGGGTACTGGAAAAGTTAGGAGGAAGTAG
Upstream 100 bases:
>100_bases AACCAATCTCCTTTGGGCTTACACTATCTCCAGCTAGATAGGTTTATGTATTACTGGTTACAGGTATAGTAAACAGGTTC GAACCCATGGTGAGTAAGCT
Downstream 100 bases:
>100_bases CGGGGGGTGGATTTGAACCACCGACCTCGGGGTTATGAGCCCCGCGGGCTACCAGGCTGCCCTACCCCGCTATGATGCCC CGCTGTTTTCTATGTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MHTYLVLRLRKKCARNFLVFLVLILLVSTYVLDTSQPKLVVSTYDLLVDQKYSDVFLLVDANGYITPPGPFTVRQNETVV VKLLVGNLSLPISELLNTNGTDLYVIDNQTSIFLPWKRIENLTLVTDIRLDLGIKPYSPYPPAFITLLEPGHWLVNFQSP YLFNVSINLYILPVDPVVEIHNNGWGTCKTYIKIYGASTFINTISIRVDPRSSRTIKINGTGQPVVVNSEVLWGPMVFSI EDGKLIMNLQSYIIPILTLETLITAIVMFTVCRKKQGTGKVRRK
Sequences:
>Translated_284_residues MHTYLVLRLRKKCARNFLVFLVLILLVSTYVLDTSQPKLVVSTYDLLVDQKYSDVFLLVDANGYITPPGPFTVRQNETVV VKLLVGNLSLPISELLNTNGTDLYVIDNQTSIFLPWKRIENLTLVTDIRLDLGIKPYSPYPPAFITLLEPGHWLVNFQSP YLFNVSINLYILPVDPVVEIHNNGWGTCKTYIKIYGASTFINTISIRVDPRSSRTIKINGTGQPVVVNSEVLWGPMVFSI EDGKLIMNLQSYIIPILTLETLITAIVMFTVCRKKQGTGKVRRK >Mature_284_residues MHTYLVLRLRKKCARNFLVFLVLILLVSTYVLDTSQPKLVVSTYDLLVDQKYSDVFLLVDANGYITPPGPFTVRQNETVV VKLLVGNLSLPISELLNTNGTDLYVIDNQTSIFLPWKRIENLTLVTDIRLDLGIKPYSPYPPAFITLLEPGHWLVNFQSP YLFNVSINLYILPVDPVVEIHNNGWGTCKTYIKIYGASTFINTISIRVDPRSSRTIKINGTGQPVVVNSEVLWGPMVFSI EDGKLIMNLQSYIIPILTLETLITAIVMFTVCRKKQGTGKVRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32106; Mature: 32106
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTYLVLRLRKKCARNFLVFLVLILLVSTYVLDTSQPKLVVSTYDLLVDQKYSDVFLLVD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEECCCCCEEEEEE ANGYITPPGPFTVRQNETVVVKLLVGNLSLPISELLNTNGTDLYVIDNQTSIFLPWKRIE CCCEECCCCCEEEECCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCEEEEEHHHHC NLTLVTDIRLDLGIKPYSPYPPAFITLLEPGHWLVNFQSPYLFNVSINLYILPVDPVVEI CEEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEEEEEEEECCCEEEE HNNGWGTCKTYIKIYGASTFINTISIRVDPRSSRTIKINGTGQPVVVNSEVLWGPMVFSI ECCCCCEEEEEEEEEECCEEEEEEEEEECCCCCCEEEECCCCCCEEEECCEEECEEEEEE EDGKLIMNLQSYIIPILTLETLITAIVMFTVCRKKQGTGKVRRK ECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHTYLVLRLRKKCARNFLVFLVLILLVSTYVLDTSQPKLVVSTYDLLVDQKYSDVFLLVD CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEECCCCCEEEEEE ANGYITPPGPFTVRQNETVVVKLLVGNLSLPISELLNTNGTDLYVIDNQTSIFLPWKRIE CCCEECCCCCEEEECCCEEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCEEEEEHHHHC NLTLVTDIRLDLGIKPYSPYPPAFITLLEPGHWLVNFQSPYLFNVSINLYILPVDPVVEI CEEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEEEEEEEECCCEEEE HNNGWGTCKTYIKIYGASTFINTISIRVDPRSSRTIKINGTGQPVVVNSEVLWGPMVFSI ECCCCCEEEEEEEEEECCEEEEEEEEEECCCCCCEEEECCCCCCEEEECCEEECEEEEEE EDGKLIMNLQSYIIPILTLETLITAIVMFTVCRKKQGTGKVRRK ECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA