| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884221
Identifier: 218884221
GI number: 218884221
Start: 864282
End: 864602
Strand: Reverse
Name: 218884221
Synonym: DKAM_0910
Alternate gene names: NA
Gene position: 864602-864282 (Counterclockwise)
Preceding gene: 218884222
Following gene: 218884220
Centisome position: 63.33
GC content: 44.24
Gene sequence:
>321_bases ATGAGTACATCGAGAGCATATATCAGGCTCGTTAAAAAGCTCACGGTGGAGAATCTATGGCTCTATATAGTCAAAATACT CATGGAGGAGGGTAGGCCGTTGAGGGCATACGATATAAAGGTTAGGTTGAGGGAGAAATTCGGTATAGATCCTCCCGCTG TAACCGTGTATACTGTCGTATACAGGATGAGCCGGGATGGACTACTATCCCGGAGACAGGAAAACGGTGAAACACTGTAC TCTGTAACAGAGAGGGGGATCAATGCATTCAAGAATGCGCTTGTATTGATCGAGGAGATTCTTAGTAAGCTTAAATTATA G
Upstream 100 bases:
>100_bases TTCAGCTCCTATAGAGCTTAAGTCATGTATCGGCTTTGTGTCCTCTTTGTAGCTAAAGCTTTTTAAACTATATTTATGAT CACAAATATAGGTTGAAACC
Downstream 100 bases:
>100_bases GTGGTCGCCGTGATTCGTGTGGCTATAATAGGTCAAGGATTGGTCGCACTACACTTCGAGGTTGGATTAGAGAGATTAAA GAACAATGAGATACCTGATT
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcription Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; PadR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSTSRAYIRLVKKLTVENLWLYIVKILMEEGRPLRAYDIKVRLREKFGIDPPAVTVYTVVYRMSRDGLLSRRQENGETLY SVTERGINAFKNALVLIEEILSKLKL
Sequences:
>Translated_106_residues MSTSRAYIRLVKKLTVENLWLYIVKILMEEGRPLRAYDIKVRLREKFGIDPPAVTVYTVVYRMSRDGLLSRRQENGETLY SVTERGINAFKNALVLIEEILSKLKL >Mature_105_residues STSRAYIRLVKKLTVENLWLYIVKILMEEGRPLRAYDIKVRLREKFGIDPPAVTVYTVVYRMSRDGLLSRRQENGETLYS VTERGINAFKNALVLIEEILSKLKL
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12362; Mature: 12231
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRAYIRLVKKLTVENLWLYIVKILMEEGRPLRAYDIKVRLREKFGIDPPAVTVYTVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEEHHHCCCCCCHHHHHHHH YRMSRDGLLSRRQENGETLYSVTERGINAFKNALVLIEEILSKLKL HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STSRAYIRLVKKLTVENLWLYIVKILMEEGRPLRAYDIKVRLREKFGIDPPAVTVYTVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEEHHHCCCCCCHHHHHHHH YRMSRDGLLSRRQENGETLYSVTERGINAFKNALVLIEEILSKLKL HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA