| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is cinA [C]
Identifier: 218884181
GI number: 218884181
Start: 835235
End: 835984
Strand: Direct
Name: cinA [C]
Synonym: DKAM_0870
Alternate gene names: 218884181
Gene position: 835235-835984 (Clockwise)
Preceding gene: 218884180
Following gene: 218884186
Centisome position: 61.18
GC content: 45.6
Gene sequence:
>750_bases TTGACCGGGTTGACCACTTGCATCATAGCTATTGGCTCAGAGATCACGAGGGGAATAATACAGGACACTAACTCTCACTG GCTTGCTCGTAGGCTGACCAGTATTGGGGTTGATGTAAGAAGGATTATCATAGTACCGGATGATATGAGTGAGATAACAT GGGCTCTCAGAGCCTGCATTGAGGCATGCAATATAGTGATTACAACCGGAGGTCTGGGCTTCACAAGTGATGATATAACG ATACCGGTAATCGCTGAATCCCTAGGATTGAAGCGAGTTTATTCGCCAGTAGTCTACGAGATGGTTAAGAATAGACTTGT AGGCAGGATACCAGAGCACCTCGAGGTAGTCTATCCTCCTGAAGGAGCCGAGCCTCTCCCGAATACTGTTGGTGTCTCAC CTGGATTCCATCTGGTCTACAATGGAAGACACCTATTCATACTTCCTGGGGTACCAGCCGAGATGGAGAACATATTCGAG GGGGAGGTAATGCCGAGGCTAGCCAGGTTAACCGGTACAAGTGTTACAACTCTCAAAGTGATCACGAAACATGAGGTGGA AGCTGAGGTAGACAAACTGTTAGAACCACTGAGAGTAAAGTATAAGTGGGCATATATAAAGACTCATGCGAGGAAACCTG TGGAAATCACGATACAGGTATATGGAGCCAATAGGGAAGATATAGATGAGAAAGTAAATACGTTGCTAAGAGAACTCAGT AAAATACTTGAGATAGAGGTGGCCTCTTAA
Upstream 100 bases:
>100_bases TCGTACCCTCAAGCGTAGCCGAGTTCATTAAAAGGATCAATGGGGTTGAGAGAGTTGGGGGACTCTTGAAGCTATCAGTG AGGGTACAGGGTGAGAGGTT
Downstream 100 bases:
>100_bases CCCTCTGCTACTACCCTCTTCGGCCTTGGTTTCACCCTTATTGTGAATGATGATTCTCTACCACGGGGGCTTACACCGTG ATAGTAGTTGAACCTGCCTT
Product: molybdopterin binding domain containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTGLTTCIIAIGSEITRGIIQDTNSHWLARRLTSIGVDVRRIIIVPDDMSEITWALRACIEACNIVITTGGLGFTSDDIT IPVIAESLGLKRVYSPVVYEMVKNRLVGRIPEHLEVVYPPEGAEPLPNTVGVSPGFHLVYNGRHLFILPGVPAEMENIFE GEVMPRLARLTGTSVTTLKVITKHEVEAEVDKLLEPLRVKYKWAYIKTHARKPVEITIQVYGANREDIDEKVNTLLRELS KILEIEVAS
Sequences:
>Translated_249_residues MTGLTTCIIAIGSEITRGIIQDTNSHWLARRLTSIGVDVRRIIIVPDDMSEITWALRACIEACNIVITTGGLGFTSDDIT IPVIAESLGLKRVYSPVVYEMVKNRLVGRIPEHLEVVYPPEGAEPLPNTVGVSPGFHLVYNGRHLFILPGVPAEMENIFE GEVMPRLARLTGTSVTTLKVITKHEVEAEVDKLLEPLRVKYKWAYIKTHARKPVEITIQVYGANREDIDEKVNTLLRELS KILEIEVAS >Mature_248_residues TGLTTCIIAIGSEITRGIIQDTNSHWLARRLTSIGVDVRRIIIVPDDMSEITWALRACIEACNIVITTGGLGFTSDDITI PVIAESLGLKRVYSPVVYEMVKNRLVGRIPEHLEVVYPPEGAEPLPNTVGVSPGFHLVYNGRHLFILPGVPAEMENIFEG EVMPRLARLTGTSVTTLKVITKHEVEAEVDKLLEPLRVKYKWAYIKTHARKPVEITIQVYGANREDIDEKVNTLLRELSK ILEIEVAS
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Homo sapiens, GI296434309, Length=162, Percent_Identity=32.7160493827161, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI41872403, Length=162, Percent_Identity=32.7160493827161, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI41872389, Length=162, Percent_Identity=32.7160493827161, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI296434312, Length=148, Percent_Identity=32.4324324324324, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788583, Length=166, Percent_Identity=31.9277108433735, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71993966, Length=103, Percent_Identity=38.8349514563107, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71993974, Length=103, Percent_Identity=38.8349514563107, Blast_Score=78, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6323832, Length=159, Percent_Identity=25.7861635220126, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001453 - InterPro: IPR023055 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 27720; Mature: 27588
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLTTCIIAIGSEITRGIIQDTNSHWLARRLTSIGVDVRRIIIVPDDMSEITWALRACI CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHH EACNIVITTGGLGFTSDDITIPVIAESLGLKRVYSPVVYEMVKNRLVGRIPEHLEVVYPP HHCCEEEEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC EGAEPLPNTVGVSPGFHLVYNGRHLFILPGVPAEMENIFEGEVMPRLARLTGTSVTTLKV CCCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEE ITKHEVEAEVDKLLEPLRVKYKWAYIKTHARKPVEITIQVYGANREDIDEKVNTLLRELS EHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH KILEIEVAS HHHEEEECC >Mature Secondary Structure TGLTTCIIAIGSEITRGIIQDTNSHWLARRLTSIGVDVRRIIIVPDDMSEITWALRACI CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHH EACNIVITTGGLGFTSDDITIPVIAESLGLKRVYSPVVYEMVKNRLVGRIPEHLEVVYPP HHCCEEEEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC EGAEPLPNTVGVSPGFHLVYNGRHLFILPGVPAEMENIFEGEVMPRLARLTGTSVTTLKV CCCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEE ITKHEVEAEVDKLLEPLRVKYKWAYIKTHARKPVEITIQVYGANREDIDEKVNTLLRELS EHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH KILEIEVAS HHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA