Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is yfiQ [C]

Identifier: 218884157

GI number: 218884157

Start: 813778

End: 815193

Strand: Direct

Name: yfiQ [C]

Synonym: DKAM_0846

Alternate gene names: 218884157

Gene position: 813778-815193 (Clockwise)

Preceding gene: 218884156

Following gene: 218884161

Centisome position: 59.61

GC content: 46.68

Gene sequence:

>1416_bases
ATGTTATTTAGCATTGATTGGTGTGGAAACATGGTTAAGGAATTATTCAGGCCCAGAAGCATAGCCGTGATAGGTGCTAG
CCGTACCCCAGGAAAAATAGGATACATAGTGCTTAGAAACATCAAGGGATATGGGTTCCAGGGTAAAGTATACCCTATAA
ATCCTCACGCAGATGAAATACTGGGGTATAAGGCGTATCCATCGATACTAGATGTGCCAGATGAAGTCGACGTAGCCATA
GTAACTGTGCCAGCCGATAATGTACCAGAAGTAATCGAGGAGTCAGGTAGGAAAGGCGTTAAAGTAGCGGTTGTAATTAC
ATCTGGATTCTCCGAAGTAGGTAACGTAGAGTTAGAGAACAAAATTGTTGAGACGGCTAGGAAATATGGAATGAGGATTC
TTGGCCCCAATATCTTCGGATATGTGTATACGCCTTCAAATATAAACGCTACCTTCGGCCCCCTGGAGGTTGCAAGAGGC
AGTATAGCACTCATCTCGCAGAGCGGGGCACTAGGTATAGCGTTAATGGGCTGGACAATAATGAATGAAATAGGCTTGTC
GGCGCTGCTAAGCGTAGGAAACATGGCAGACCTGGATGTAGCTGAGCTCTCAGAATACCTTGCAGATGATCCCAACACAA
GGGTTATAACAATATATCTCGAGGGAATAAAGCCTGGTAGAGGAGGGGAATTCATTAAAAAGATGAGGGAGGTCACGTTA
AAGAAGCCCGTTGTAGTAATAAAGGCAGGTAGAAGCAGACGCGGTGCAGCTGCAGCTGCAAGCCATACTGGTAGCTTGGC
GGGCAGCGATAATCTCTATGAGGCAGCATTTAAGCAGGCAGGCATTATTAGGGCATATACTGTGGAGGAGATGTTCGACA
TAGCCAGAGTCTTCGCGGCACAACCATTGCCCAGGGGCGAGAACACCATAATAATAACCAATGGCGGCGGGGTAGGAGTC
CTCGCCACCGATGCCGCGGAATTTAATGATGTGAAATTACTTGAACCAAGCCAGGAGCTCAAGGAGAGACTTAAGACCAC
TATGCCGTGGTTCGGTAGCGCTAAGAACCCGGTTGACTTAACTGGGCAGGCCGTTGTAGATAACTATGTTAAAGCATTAA
AGATAGCTGCTGAATCAAGTGAGGTCGACAACATAGTCATACTATATTGTAGAACAGCTGTACTGGATCCGCGCGAACTA
GCTAAGGCCATAGTAGAGCTCTATGAATCAGAGCATATAAGTAAGACAACGGTAGCCGGCTTCGTAGGCGGCGAGGACAC
ATATGAGGCAATAAAGTACCTGAACAGACATGATATACCCGCTTATCCATCGCCTGAGAGAGCGGTTTACGCGCTTTCAA
AAATGATATGGTATAGAAGATACCTGGAGGCTAGAAAAGCCTCGCCCCAGGCTTAA

Upstream 100 bases:

>100_bases
GTTTTACGTCTTGAAGAATATCTTTAAGCAATAGGGTAGAAGACGAATAGCTCCAACTCTAACCATGTAGAACAGAGAGA
TATTATATATTTAAATACAT

Downstream 100 bases:

>100_bases
CTGTTTTTTCAACAGTAGCTATAACAGGTGGATCAGTATCCGTTGCTAGAAGCATTCCCTGACTCTCAAAACCCATCATT
TTCTTAGGTTTCAAATTAGC

Product: Acetyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MLFSIDWCGNMVKELFRPRSIAVIGASRTPGKIGYIVLRNIKGYGFQGKVYPINPHADEILGYKAYPSILDVPDEVDVAI
VTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELENKIVETARKYGMRILGPNIFGYVYTPSNINATFGPLEVARG
SIALISQSGALGIALMGWTIMNEIGLSALLSVGNMADLDVAELSEYLADDPNTRVITIYLEGIKPGRGGEFIKKMREVTL
KKPVVVIKAGRSRRGAAAAASHTGSLAGSDNLYEAAFKQAGIIRAYTVEEMFDIARVFAAQPLPRGENTIIITNGGGVGV
LATDAAEFNDVKLLEPSQELKERLKTTMPWFGSAKNPVDLTGQAVVDNYVKALKIAAESSEVDNIVILYCRTAVLDPREL
AKAIVELYESEHISKTTVAGFVGGEDTYEAIKYLNRHDIPAYPSPERAVYALSKMIWYRRYLEARKASPQA

Sequences:

>Translated_471_residues
MLFSIDWCGNMVKELFRPRSIAVIGASRTPGKIGYIVLRNIKGYGFQGKVYPINPHADEILGYKAYPSILDVPDEVDVAI
VTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELENKIVETARKYGMRILGPNIFGYVYTPSNINATFGPLEVARG
SIALISQSGALGIALMGWTIMNEIGLSALLSVGNMADLDVAELSEYLADDPNTRVITIYLEGIKPGRGGEFIKKMREVTL
KKPVVVIKAGRSRRGAAAAASHTGSLAGSDNLYEAAFKQAGIIRAYTVEEMFDIARVFAAQPLPRGENTIIITNGGGVGV
LATDAAEFNDVKLLEPSQELKERLKTTMPWFGSAKNPVDLTGQAVVDNYVKALKIAAESSEVDNIVILYCRTAVLDPREL
AKAIVELYESEHISKTTVAGFVGGEDTYEAIKYLNRHDIPAYPSPERAVYALSKMIWYRRYLEARKASPQA
>Mature_471_residues
MLFSIDWCGNMVKELFRPRSIAVIGASRTPGKIGYIVLRNIKGYGFQGKVYPINPHADEILGYKAYPSILDVPDEVDVAI
VTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELENKIVETARKYGMRILGPNIFGYVYTPSNINATFGPLEVARG
SIALISQSGALGIALMGWTIMNEIGLSALLSVGNMADLDVAELSEYLADDPNTRVITIYLEGIKPGRGGEFIKKMREVTL
KKPVVVIKAGRSRRGAAAAASHTGSLAGSDNLYEAAFKQAGIIRAYTVEEMFDIARVFAAQPLPRGENTIIITNGGGVGV
LATDAAEFNDVKLLEPSQELKERLKTTMPWFGSAKNPVDLTGQAVVDNYVKALKIAAESSEVDNIVILYCRTAVLDPREL
AKAIVELYESEHISKTTVAGFVGGEDTYEAIKYLNRHDIPAYPSPERAVYALSKMIWYRRYLEARKASPQA

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=460, Percent_Identity=31.5217391304348, Blast_Score=252, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 51197; Mature: 51197

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSIDWCGNMVKELFRPRSIAVIGASRTPGKIGYIVLRNIKGYGFQGKVYPINPHADEI
CEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHH
LGYKAYPSILDVPDEVDVAIVTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELEN
CCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEEECCCHHHCCEEHHH
KIVETARKYGMRILGPNIFGYVYTPSNINATFGPLEVARGSIALISQSGALGIALMGWTI
HHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEHHHHH
MNEIGLSALLSVGNMADLDVAELSEYLADDPNTRVITIYLEGIKPGRGGEFIKKMREVTL
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
KKPVVVIKAGRSRRGAAAAASHTGSLAGSDNLYEAAFKQAGIIRAYTVEEMFDIARVFAA
CCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC
QPLPRGENTIIITNGGGVGVLATDAAEFNDVKLLEPSQELKERLKTTMPWFGSAKNPVDL
CCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCC
TGQAVVDNYVKALKIAAESSEVDNIVILYCRTAVLDPRELAKAIVELYESEHISKTTVAG
CHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCHHHEEE
FVGGEDTYEAIKYLNRHDIPAYPSPERAVYALSKMIWYRRYLEARKASPQA
ECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLFSIDWCGNMVKELFRPRSIAVIGASRTPGKIGYIVLRNIKGYGFQGKVYPINPHADEI
CEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHH
LGYKAYPSILDVPDEVDVAIVTVPADNVPEVIEESGRKGVKVAVVITSGFSEVGNVELEN
CCCCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEEECCCHHHCCEEHHH
KIVETARKYGMRILGPNIFGYVYTPSNINATFGPLEVARGSIALISQSGALGIALMGWTI
HHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHHHHCCCCEEEEECCCCEEEEEHHHHH
MNEIGLSALLSVGNMADLDVAELSEYLADDPNTRVITIYLEGIKPGRGGEFIKKMREVTL
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
KKPVVVIKAGRSRRGAAAAASHTGSLAGSDNLYEAAFKQAGIIRAYTVEEMFDIARVFAA
CCCEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHC
QPLPRGENTIIITNGGGVGVLATDAAEFNDVKLLEPSQELKERLKTTMPWFGSAKNPVDL
CCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCC
TGQAVVDNYVKALKIAAESSEVDNIVILYCRTAVLDPRELAKAIVELYESEHISKTTVAG
CHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHCCCCHHHEEE
FVGGEDTYEAIKYLNRHDIPAYPSPERAVYALSKMIWYRRYLEARKASPQA
ECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]