Click here to switch to the map view.

The map label for this gene is yjbQ [C]

Identifier: 218884152

GI number: 218884152

Start: 809728

End: 810153

Strand: Direct

Name: yjbQ [C]

Synonym: DKAM_0841

Alternate gene names: 218884152

Gene position: 809728-810153 (Clockwise)

Preceding gene: 218884145

Following gene: 218884153

Centisome position: 59.31

GC content: 44.37

Gene sequence:

>426_bases
GTGATCACTGTGAAAATATACCATCACACTGTGAGGTTCTCGACCAACGCTCAGTTCCAATTAATAGATGTAACAAGGAC
GGTCGAGGAGGCTGTGGCTAAATCAGGTGTCTTAAACGGTATCGTCCTTATTCATGCTCCCCATGCAACAGCAGCCATAA
TACTTAATGAACACGAGGAGGGGTTGATCAATGATATACTTGATAAGCTAAGGGATCTCACGGAGCCGGGAAGCAGAAGG
TGGAGGCATAACATGATAGATGATAATGCTCATGCACACATTGGCTCAGCAATTATAGGGGCTGAGAGGATCATCCCGGT
TATAAATGGGAGGATAGCTAGAGGAACTTGGCAGAATATATTTTTCGTTGAAATGGATGGCCCACGTTCAAATAGGGAGG
TTGTGATAACAGTTATTGGTGAGTGA

Upstream 100 bases:

>100_bases
TCCTCCACAGGGTATCACCACTACTAAAATATAGTGTATTCGGCCTATATTAAGTTTTAATAATATTTTAAACACGCTAG
TGGATAATATTATTTCCTAG

Downstream 100 bases:

>100_bases
TATGAGGTTCTATATAGCCTGCGAGAACGAGATACTGGATGGATCCGCAACAGACGTGTACTTCACGAGGACCTATAAGA
TACTTAAAGCCAAGGGTGTC

Product: UPF0047 domain containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MITVKIYHHTVRFSTNAQFQLIDVTRTVEEAVAKSGVLNGIVLIHAPHATAAIILNEHEEGLINDILDKLRDLTEPGSRR
WRHNMIDDNAHAHIGSAIIGAERIIPVINGRIARGTWQNIFFVEMDGPRSNREVVITVIGE

Sequences:

>Translated_141_residues
MITVKIYHHTVRFSTNAQFQLIDVTRTVEEAVAKSGVLNGIVLIHAPHATAAIILNEHEEGLINDILDKLRDLTEPGSRR
WRHNMIDDNAHAHIGSAIIGAERIIPVINGRIARGTWQNIFFVEMDGPRSNREVVITVIGE
>Mature_141_residues
MITVKIYHHTVRFSTNAQFQLIDVTRTVEEAVAKSGVLNGIVLIHAPHATAAIILNEHEEGLINDILDKLRDLTEPGSRR
WRHNMIDDNAHAHIGSAIIGAERIIPVINGRIARGTWQNIFFVEMDGPRSNREVVITVIGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15759; Mature: 15759

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVKIYHHTVRFSTNAQFQLIDVTRTVEEAVAKSGVLNGIVLIHAPHATAAIILNEHEE
CEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCC
GLINDILDKLRDLTEPGSRRWRHNMIDDNAHAHIGSAIIGAERIIPVINGRIARGTWQNI
CHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHCHHHHCHHHEEHHHCCEECCCCCCEE
FFVEMDGPRSNREVVITVIGE
EEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MITVKIYHHTVRFSTNAQFQLIDVTRTVEEAVAKSGVLNGIVLIHAPHATAAIILNEHEE
CEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCC
GLINDILDKLRDLTEPGSRRWRHNMIDDNAHAHIGSAIIGAERIIPVINGRIARGTWQNI
CHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHCHHHHCHHHEEHHHCCEECCCCCCEE
FFVEMDGPRSNREVVITVIGE
EEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]