| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is purP [H]
Identifier: 218883840
GI number: 218883840
Start: 496620
End: 497729
Strand: Direct
Name: purP [H]
Synonym: DKAM_0529
Alternate gene names: 218883840
Gene position: 496620-497729 (Clockwise)
Preceding gene: 218883839
Following gene: 218883841
Centisome position: 36.38
GC content: 44.23
Gene sequence:
>1110_bases TTGAGTACTAGGTTTAACCCTAGGGACCTAATTGCACATTATGAGCCGGGGAGAATAGCTATTGCAGCTGTTGCAAGCCA TTCAGCACTGGATGTATTCGATGGAGCTAAAGATGAGGGTTTCAGAACCATAGCTGTCTGCCAGGTTGGAAGAGAGAAGA CATATATGAGGTTAAATACGGTGATCGACGAGTATATAATATTAGATAGCTTTAAAGACGTTGTGAAACCCTCGGCAATG GATTACCTGGCTGGCAAGAACGCTATTATAGTGCCTAACCGTAGTTTCTCAGTATATGTAGGGTATGATGCTATCGAAAG CGAGTTGAGGATCCCGGTATTTGGCAACAAGTATCTCCTCAGATACGAGGAAAGGACCGGACCTAAGAACTACTATATGC TTCTCCAGGAAGCTGGGATAAGACATCCAAGGATCTATAGGGATCCAGATGAGATAGATAGGCCTGTAATAGTTAAGATA CCACATGCAAGGAAAAGGGTTGAACGTGGATTCTTTATAGCAGTGGATAGGGACGACTTTTACAAGAAGATGAAGAGGCT GGTTAATAATAGTGTTATAAGAAAAGAAGATATCGTTTCAGCCTCGATAGAGGAGCTAGTGGTGGGTGCCCACTTCAACG TCAACTACTTCCATAGTATAGCCAGGAAGAGGGTGGAGTTGCTGAGCATAGACCGCAGGATACAGAGCAACCTAGATGGC TTCCTACATCTAACAGCTAGTATACAGTTGGAGCTTGAAGAATACTTGGATGTAGAGATGATTGAAGTGGGGCACGAGCC CGCAACCATAAGGGAGTCACTACTTGAGAAGCTATTTGATTATGGCGATAGATTCGTGGATGCATGCAAGAGGATCGTGG AGCCCGGTGTCATAGGGCCTTTCGCACTTCAATTAATTGTAACCAAGGATCTTGATATAGTAGTGTATGATGTAGCACCA CGTATAGGCGGAGGCACAAATATCTATATGGGGATTGGTAGCCAGTACAGTAAGCTCTATTTCGGGAAACCAATCAGTAT GGGGAGGAGGATCGCTATCGAGATACATGAATGCATTGAATCAGGTTGCTTACAGGAGATAGTCACGTGA
Upstream 100 bases:
>100_bases AGCCGGCTCATTGAGGAACACGGTTTTCACCCATATGTAATCGGGGAGATTGTTGAGGGGAACGGATTGGTTCATGTGAT AACTCCGTATGGTGATATAG
Downstream 100 bases:
>100_bases GGTGTTCGCATGTCTGGAAGCATTTGCCCACTTGAATGGAGATATGGTTCAACCGAGATGAGAAGGGTGTTTTCCAGGAG AAATATAGTGGATACATACA
Product: 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase-like protein
Products: NA
Alternate protein names: 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate--formate ligase [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSTRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNTVIDEYIILDSFKDVVKPSAM DYLAGKNAIIVPNRSFSVYVGYDAIESELRIPVFGNKYLLRYEERTGPKNYYMLLQEAGIRHPRIYRDPDEIDRPVIVKI PHARKRVERGFFIAVDRDDFYKKMKRLVNNSVIRKEDIVSASIEELVVGAHFNVNYFHSIARKRVELLSIDRRIQSNLDG FLHLTASIQLELEEYLDVEMIEVGHEPATIRESLLEKLFDYGDRFVDACKRIVEPGVIGPFALQLIVTKDLDIVVYDVAP RIGGGTNIYMGIGSQYSKLYFGKPISMGRRIAIEIHECIESGCLQEIVT
Sequences:
>Translated_369_residues MSTRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNTVIDEYIILDSFKDVVKPSAM DYLAGKNAIIVPNRSFSVYVGYDAIESELRIPVFGNKYLLRYEERTGPKNYYMLLQEAGIRHPRIYRDPDEIDRPVIVKI PHARKRVERGFFIAVDRDDFYKKMKRLVNNSVIRKEDIVSASIEELVVGAHFNVNYFHSIARKRVELLSIDRRIQSNLDG FLHLTASIQLELEEYLDVEMIEVGHEPATIRESLLEKLFDYGDRFVDACKRIVEPGVIGPFALQLIVTKDLDIVVYDVAP RIGGGTNIYMGIGSQYSKLYFGKPISMGRRIAIEIHECIESGCLQEIVT >Mature_368_residues STRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNTVIDEYIILDSFKDVVKPSAMD YLAGKNAIIVPNRSFSVYVGYDAIESELRIPVFGNKYLLRYEERTGPKNYYMLLQEAGIRHPRIYRDPDEIDRPVIVKIP HARKRVERGFFIAVDRDDFYKKMKRLVNNSVIRKEDIVSASIEELVVGAHFNVNYFHSIARKRVELLSIDRRIQSNLDGF LHLTASIQLELEEYLDVEMIEVGHEPATIRESLLEKLFDYGDRFVDACKRIVEPGVIGPFALQLIVTKDLDIVVYDVAPR IGGGTNIYMGIGSQYSKLYFGKPISMGRRIAIEIHECIESGCLQEIVT
Specific function: Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates [H]
COG id: COG1759
COG function: function code R; ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR009720 - InterPro: IPR010672 - InterPro: IPR013817 [H]
Pfam domain/function: PF06849 DUF1246; PF06973 DUF1297 [H]
EC number: NA
Molecular weight: Translated: 42088; Mature: 41957
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNT CCCCCCHHHHHEECCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH VIDEYIILDSFKDVVKPSAMDYLAGKNAIIVPNRSFSVYVGYDAIESELRIPVFGNKYLL HHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEEEEHHHHCCCEEEEEECCCEEE RYEERTGPKNYYMLLQEAGIRHPRIYRDPDEIDRPVIVKIPHARKRVERGFFIAVDRDDF EEECCCCCCHHEEEEECCCCCCCCCCCCHHHCCCCEEEECCCHHHHHCCCEEEEECCHHH YKKMKRLVNNSVIRKEDIVSASIEELVVGAHFNVNYFHSIARKRVELLSIDRRIQSNLDG HHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE FLHLTASIQLELEEYLDVEMIEVGHEPATIRESLLEKLFDYGDRFVDACKRIVEPGVIGP EEEEEEEEEEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH FALQLIVTKDLDIVVYDVAPRIGGGTNIYMGIGSQYSKLYFGKPISMGRRIAIEIHECIE HHEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCEECCCCCCCCCEEEEEHHHHHH SGCLQEIVT HHHHHHHCC >Mature Secondary Structure STRFNPRDLIAHYEPGRIAIAAVASHSALDVFDGAKDEGFRTIAVCQVGREKTYMRLNT CCCCCHHHHHEECCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCHHHHHHHH VIDEYIILDSFKDVVKPSAMDYLAGKNAIIVPNRSFSVYVGYDAIESELRIPVFGNKYLL HHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEEEEHHHHCCCEEEEEECCCEEE RYEERTGPKNYYMLLQEAGIRHPRIYRDPDEIDRPVIVKIPHARKRVERGFFIAVDRDDF EEECCCCCCHHEEEEECCCCCCCCCCCCHHHCCCCEEEECCCHHHHHCCCEEEEECCHHH YKKMKRLVNNSVIRKEDIVSASIEELVVGAHFNVNYFHSIARKRVELLSIDRRIQSNLDG HHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE FLHLTASIQLELEEYLDVEMIEVGHEPATIRESLLEKLFDYGDRFVDACKRIVEPGVIGP EEEEEEEEEEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH FALQLIVTKDLDIVVYDVAPRIGGGTNIYMGIGSQYSKLYFGKPISMGRRIAIEIHECIE HHEEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCEECCCCCCCCCEEEEEHHHHHH SGCLQEIVT HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA