| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883734
Identifier: 218883734
GI number: 218883734
Start: 395043
End: 396596
Strand: Reverse
Name: 218883734
Synonym: DKAM_0423
Alternate gene names: NA
Gene position: 396596-395043 (Counterclockwise)
Preceding gene: 218883735
Following gene: 218883733
Centisome position: 29.05
GC content: 47.04
Gene sequence:
>1554_bases TTGAGGATAGCATTGGTGACTGGTAGGCTAGCAGGGGATGCTATTAGGAAAATAGCGTCGGGGATCAATGTTTCCGGGAT CGAGTTAGTAGTCGTGGAATTACCAATACCTGTAGCAGCCATGATGAGTGATACTTATCTCGAGAAGGAGCTGCCTAGGC ACATGGATGTGCTTGGAAACGTGGACCTGGTTATAGTTCCGGGATACACTAGTGGTGACCTCACGAGGGTATCAGAACTT ATCGGTAAACCGGTGGTAAAGGGGGTGAAGTACATGTATGACATCCCATTAATGATTAAAGCCATCTCCAATGGTATTGA ACTCTCACCCAGGACGCCGGCAGATGATGTGGTAAGGCTCTATAGGGCTGAGAGAGATAAAGAGGTGCTCAGGGGTCTCA GAGAAAAGGCTAGTACACAATACTATTTCACCATAGGGGATAGATATAAAATCTACGTGAGCCCCGTTTATCCTATTATC ATCCACGAGGTATACATGGGACATGATGCATACACGCTTGACGACATCATCAAGAAATCCGAGAAGGCTTTACTCGATGG AGCTGATATAGTTGTAGTCGGGTTTCCCCATAACGCACCGGTAGATATCATTGAAGAGGTGGTTGCAGAAGTAAAGAAGA GGCTTGGAAGACCCATTGGCGTTGATGTAGAGGATGTCAACGCACTATTGAAAGCTGCTGAGGCCGGAGCAGATGTGTTG ATGAGTCTCAGTTACTCTAAGATAATGATGCTTGATAATGCATCATCCATTAGCGATAAAGCCGTTGTCTTGATACCGGA TCACAGCATCCACGAGGAAGACAAGCTTGGTAGTCTTGTAGAGGCATATAAGCTGGCAGTGGAGAAAGGGCTCTCAAAGA TAATAGTGGATCCTGTCCTAGACCCCCCGCTTAGCGGGCTTGCATCCTCCCTAGAGAGATACAGGGCGGCAAGACGGTTG TTCCCTCATACTCCATTATTAATGGGTGTTGGAAACGTTACCGAGCTAATAGACGCTGACAGCGTTGGCGTAAACGCTAT CCTGGCATCGATAGGTGTTGAAATCGGGGTCGAAGCTTATTTGACAACTGAGGCTAGTGTGAAGACGCGTGGCTCCACCA GGGAGCTTAGAAGAGCCCTCGACATGTGCCTTATAGCGCGTAACGAGTCCAGGCCTCCAAAGGATTTATCCATAAACCTT CTGTTACTGAAGGATAAGCGGAGGAAGTCTATTGGTACCAGGCAGCGTGGTGTAATCCTGTATGCTAGGGAAAGAAGGAG CTCGGGGATCGATCCAAAAGGCGTTTTTAAGATATATGTGGATCATGATGCTGGAAACATCATCGTCGAGCACTACAGGC TCGGAGAATTAGAGCCCGACTACACTATCATTGGGAATGATCCATACGCTATACTTTCAGAGATAACTGGGGGACAGCTC GCTTCAAAGCCCGAGCACTATTTCTACTTGGGCTACGAGTTAAGCAAGGCATATGTAGCGTTGAAAACCGGGAAAGAATA CATTCAAGAAGAGGATTTATTCGAGGATACTTAA
Upstream 100 bases:
>100_bases TCCATTCTACGTGGGTATCATTAAGAGGCTTAACGATATAGAGGGCGTGGAGATAATAGATCACCCTGACAGGATCTTAG AATACATCTAGGTGAATTAA
Downstream 100 bases:
>100_bases AAATATAGGTTTCAACATCCCATATAGCAGTCTTAGAGGTGCTTTCATTAATGGAGGATAAAATAATTACAACCCTCCAC GGGGCTGGCGGAATCGAGTC
Product: dihydropteroate synthase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MRIALVTGRLAGDAIRKIASGINVSGIELVVVELPIPVAAMMSDTYLEKELPRHMDVLGNVDLVIVPGYTSGDLTRVSEL IGKPVVKGVKYMYDIPLMIKAISNGIELSPRTPADDVVRLYRAERDKEVLRGLREKASTQYYFTIGDRYKIYVSPVYPII IHEVYMGHDAYTLDDIIKKSEKALLDGADIVVVGFPHNAPVDIIEEVVAEVKKRLGRPIGVDVEDVNALLKAAEAGADVL MSLSYSKIMMLDNASSISDKAVVLIPDHSIHEEDKLGSLVEAYKLAVEKGLSKIIVDPVLDPPLSGLASSLERYRAARRL FPHTPLLMGVGNVTELIDADSVGVNAILASIGVEIGVEAYLTTEASVKTRGSTRELRRALDMCLIARNESRPPKDLSINL LLLKDKRRKSIGTRQRGVILYARERRSSGIDPKGVFKIYVDHDAGNIIVEHYRLGELEPDYTIIGNDPYAILSEITGGQL ASKPEHYFYLGYELSKAYVALKTGKEYIQEEDLFEDT
Sequences:
>Translated_517_residues MRIALVTGRLAGDAIRKIASGINVSGIELVVVELPIPVAAMMSDTYLEKELPRHMDVLGNVDLVIVPGYTSGDLTRVSEL IGKPVVKGVKYMYDIPLMIKAISNGIELSPRTPADDVVRLYRAERDKEVLRGLREKASTQYYFTIGDRYKIYVSPVYPII IHEVYMGHDAYTLDDIIKKSEKALLDGADIVVVGFPHNAPVDIIEEVVAEVKKRLGRPIGVDVEDVNALLKAAEAGADVL MSLSYSKIMMLDNASSISDKAVVLIPDHSIHEEDKLGSLVEAYKLAVEKGLSKIIVDPVLDPPLSGLASSLERYRAARRL FPHTPLLMGVGNVTELIDADSVGVNAILASIGVEIGVEAYLTTEASVKTRGSTRELRRALDMCLIARNESRPPKDLSINL LLLKDKRRKSIGTRQRGVILYARERRSSGIDPKGVFKIYVDHDAGNIIVEHYRLGELEPDYTIIGNDPYAILSEITGGQL ASKPEHYFYLGYELSKAYVALKTGKEYIQEEDLFEDT >Mature_517_residues MRIALVTGRLAGDAIRKIASGINVSGIELVVVELPIPVAAMMSDTYLEKELPRHMDVLGNVDLVIVPGYTSGDLTRVSEL IGKPVVKGVKYMYDIPLMIKAISNGIELSPRTPADDVVRLYRAERDKEVLRGLREKASTQYYFTIGDRYKIYVSPVYPII IHEVYMGHDAYTLDDIIKKSEKALLDGADIVVVGFPHNAPVDIIEEVVAEVKKRLGRPIGVDVEDVNALLKAAEAGADVL MSLSYSKIMMLDNASSISDKAVVLIPDHSIHEEDKLGSLVEAYKLAVEKGLSKIIVDPVLDPPLSGLASSLERYRAARRL FPHTPLLMGVGNVTELIDADSVGVNAILASIGVEIGVEAYLTTEASVKTRGSTRELRRALDMCLIARNESRPPKDLSINL LLLKDKRRKSIGTRQRGVILYARERRSSGIDPKGVFKIYVDHDAGNIIVEHYRLGELEPDYTIIGNDPYAILSEITGGQL ASKPEHYFYLGYELSKAYVALKTGKEYIQEEDLFEDT
Specific function: Unknown. Does not possess dihydropteroate synthase (DHPS) activity since it does not catalyze the condensation of 6- hydroxymethyl-7,8-dihydropterin pyrophosphate (DHPP) and 4- aminobenzoate to form 7,8-dihydropteroate [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005236 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: NA
Molecular weight: Translated: 57060; Mature: 57060
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS50972 PTERIN_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALVTGRLAGDAIRKIASGINVSGIELVVVELPIPVAAMMSDTYLEKELPRHMDVLGN CEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC VDLVIVPGYTSGDLTRVSELIGKPVVKGVKYMYDIPLMIKAISNGIELSPRTPADDVVRL CCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHH YRAERDKEVLRGLREKASTQYYFTIGDRYKIYVSPVYPIIIHEVYMGHDAYTLDDIIKKS HHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHH EKALLDGADIVVVGFPHNAPVDIIEEVVAEVKKRLGRPIGVDVEDVNALLKAAEAGADVL HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH MSLSYSKIMMLDNASSISDKAVVLIPDHSIHEEDKLGSLVEAYKLAVEKGLSKIIVDPVL HHCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHEECCCCC DPPLSGLASSLERYRAARRLFPHTPLLMGVGNVTELIDADSVGVNAILASIGVEIGVEAY CCCHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHHCCCCCCHHHHHHHHCHHCCCEEE LTTEASVKTRGSTRELRRALDMCLIARNESRPPKDLSINLLLLKDKRRKSIGTRQRGVIL EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCEEE YARERRSSGIDPKGVFKIYVDHDAGNIIVEHYRLGELEPDYTIIGNDPYAILSEITGGQL EEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHCCCCCC ASKPEHYFYLGYELSKAYVALKTGKEYIQEEDLFEDT CCCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCCC >Mature Secondary Structure MRIALVTGRLAGDAIRKIASGINVSGIELVVVELPIPVAAMMSDTYLEKELPRHMDVLGN CEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC VDLVIVPGYTSGDLTRVSELIGKPVVKGVKYMYDIPLMIKAISNGIELSPRTPADDVVRL CCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHH YRAERDKEVLRGLREKASTQYYFTIGDRYKIYVSPVYPIIIHEVYMGHDAYTLDDIIKKS HHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHH EKALLDGADIVVVGFPHNAPVDIIEEVVAEVKKRLGRPIGVDVEDVNALLKAAEAGADVL HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHH MSLSYSKIMMLDNASSISDKAVVLIPDHSIHEEDKLGSLVEAYKLAVEKGLSKIIVDPVL HHCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHEECCCCC DPPLSGLASSLERYRAARRLFPHTPLLMGVGNVTELIDADSVGVNAILASIGVEIGVEAY CCCHHHHHHHHHHHHHHHHHCCCCCHHEECCCHHHHHCCCCCCHHHHHHHHCHHCCCEEE LTTEASVKTRGSTRELRRALDMCLIARNESRPPKDLSINLLLLKDKRRKSIGTRQRGVIL EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCEEE YARERRSSGIDPKGVFKIYVDHDAGNIIVEHYRLGELEPDYTIIGNDPYAILSEITGGQL EEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCHHHHHHHCCCCCC ASKPEHYFYLGYELSKAYVALKTGKEYIQEEDLFEDT CCCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]