| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883646
Identifier: 218883646
GI number: 218883646
Start: 307981
End: 308931
Strand: Reverse
Name: 218883646
Synonym: DKAM_0335
Alternate gene names: NA
Gene position: 308931-307981 (Counterclockwise)
Preceding gene: 218883647
Following gene: 218883642
Centisome position: 22.63
GC content: 46.06
Gene sequence:
>951_bases GTGGTGGATATCTTGAAGCAATGCCTTAAGATAGGGGGTGTGTGCATAGGGTTCTATGGCGAGGATTTAGTAGCCATCGT GGAGTCATTCACAAACTCGTTTTCACGCAGGTACCTACCCGATCCCCGTCTCTGCGAGCACTGCAATAGTAGAGGTATAG AGGTGTCATGGATAAGGGGGCAGGGTTTTAACGTGGTTGCTGCTGAATATTATAATTCATCCGGCCTCCCGGATAGATAC ATTGTGGAGGGTGGACCGGTAGAGCCATATGTTAACGAGTCACCGGTCTTCTTCCTGCTTCAAGCGTTATCCAGGAGGCT CTTGCTGGAGAAACGGGTTGTTTTAACTGATTCAATCACTATACATATACCTGGCACCGATAAAGCCATACTGTTACTAG GATATCCTCATACAGGTAAAAGCACTATTGCAAGTATAGCGTATTCAAGAGGCTTCAACCTGCTTTCAACGGAGAACACG GTGGTAGAGGCCTCGGATAATGGACTCTACGTAAAATCCGGTTCCTCGGTGCTTGTCTACGATCCCAGGGTCAAAGACTT GTATGAGGTGAGAATAACACCCCAAGGGAAGACGAGGCATGGTTACGAGATAATAGATATCAACAATAGCGACCGTGAGA AATTATTTGAGAAAGGCGTAAGGATATCATCAATCTACATACTACACACGAGTTTCTCGAGTAGCGGTGTGTCACTGGAA CCCGTTAAAGGGAGGAAGATTAGTAAGACTCTATGGTATTTCGCTACAGGGGTGTTGAAAGGAGTTGATTTCTATGAGCC AGCTCCACTGGATATGCCGTTGAATGGGTTGAAAACATGTCTCCTCGAGTTCCTTAATATAGTTAGAAGAATGTATGAGG ACAGGGTGTTCGAGGTATTTGGTTCTCCCCTAGAGGTCTTCAATGAGATCACTAGGGTTCGGGTCTGGTGA
Upstream 100 bases:
>100_bases ATATTGATGATGCATCCAAGCAATGATATCTGTGAAGAAAATACCTGGTATATGAAGCGGTTCATATAACAATAAATATA GCAGGCCCGGATAGAATCTA
Downstream 100 bases:
>100_bases ATACCTGTGATTGCCTGTAGATATTTCTGGCTACCTGCTTCACCCCATTATTTCTTATTCCCCCGCTCTCTCCGGCCTCA TCCTTCACAGTAGGGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MVDILKQCLKIGGVCIGFYGEDLVAIVESFTNSFSRRYLPDPRLCEHCNSRGIEVSWIRGQGFNVVAAEYYNSSGLPDRY IVEGGPVEPYVNESPVFFLLQALSRRLLLEKRVVLTDSITIHIPGTDKAILLLGYPHTGKSTIASIAYSRGFNLLSTENT VVEASDNGLYVKSGSSVLVYDPRVKDLYEVRITPQGKTRHGYEIIDINNSDREKLFEKGVRISSIYILHTSFSSSGVSLE PVKGRKISKTLWYFATGVLKGVDFYEPAPLDMPLNGLKTCLLEFLNIVRRMYEDRVFEVFGSPLEVFNEITRVRVW
Sequences:
>Translated_316_residues MVDILKQCLKIGGVCIGFYGEDLVAIVESFTNSFSRRYLPDPRLCEHCNSRGIEVSWIRGQGFNVVAAEYYNSSGLPDRY IVEGGPVEPYVNESPVFFLLQALSRRLLLEKRVVLTDSITIHIPGTDKAILLLGYPHTGKSTIASIAYSRGFNLLSTENT VVEASDNGLYVKSGSSVLVYDPRVKDLYEVRITPQGKTRHGYEIIDINNSDREKLFEKGVRISSIYILHTSFSSSGVSLE PVKGRKISKTLWYFATGVLKGVDFYEPAPLDMPLNGLKTCLLEFLNIVRRMYEDRVFEVFGSPLEVFNEITRVRVW >Mature_316_residues MVDILKQCLKIGGVCIGFYGEDLVAIVESFTNSFSRRYLPDPRLCEHCNSRGIEVSWIRGQGFNVVAAEYYNSSGLPDRY IVEGGPVEPYVNESPVFFLLQALSRRLLLEKRVVLTDSITIHIPGTDKAILLLGYPHTGKSTIASIAYSRGFNLLSTENT VVEASDNGLYVKSGSSVLVYDPRVKDLYEVRITPQGKTRHGYEIIDINNSDREKLFEKGVRISSIYILHTSFSSSGVSLE PVKGRKISKTLWYFATGVLKGVDFYEPAPLDMPLNGLKTCLLEFLNIVRRMYEDRVFEVFGSPLEVFNEITRVRVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35599; Mature: 35599
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDILKQCLKIGGVCIGFYGEDLVAIVESFTNSFSRRYLPDPRLCEHCNSRGIEVSWIRG CHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEC QGFNVVAAEYYNSSGLPDRYIVEGGPVEPYVNESPVFFLLQALSRRLLLEKRVVLTDSIT CCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEE IHIPGTDKAILLLGYPHTGKSTIASIAYSRGFNLLSTENTVVEASDNGLYVKSGSSVLVY EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCEEEEECCCEEEEE DPRVKDLYEVRITPQGKTRHGYEIIDINNSDREKLFEKGVRISSIYILHTSFSSSGVSLE CCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEEEEEECCCCCCEEC PVKGRKISKTLWYFATGVLKGVDFYEPAPLDMPLNGLKTCLLEFLNIVRRMYEDRVFEVF CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GSPLEVFNEITRVRVW CCHHHHHHHHHHEECC >Mature Secondary Structure MVDILKQCLKIGGVCIGFYGEDLVAIVESFTNSFSRRYLPDPRLCEHCNSRGIEVSWIRG CHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEC QGFNVVAAEYYNSSGLPDRYIVEGGPVEPYVNESPVFFLLQALSRRLLLEKRVVLTDSIT CCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEE IHIPGTDKAILLLGYPHTGKSTIASIAYSRGFNLLSTENTVVEASDNGLYVKSGSSVLVY EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEEEECCCEEEEECCCEEEEE DPRVKDLYEVRITPQGKTRHGYEIIDINNSDREKLFEKGVRISSIYILHTSFSSSGVSLE CCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEEEEEECCCCCCEEC PVKGRKISKTLWYFATGVLKGVDFYEPAPLDMPLNGLKTCLLEFLNIVRRMYEDRVFEVF CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GSPLEVFNEITRVRVW CCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA