Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883501

Identifier: 218883501

GI number: 218883501

Start: 176255

End: 177892

Strand: Direct

Name: 218883501

Synonym: DKAM_0188

Alternate gene names: NA

Gene position: 176255-177892 (Clockwise)

Preceding gene: 218883499

Following gene: 218883502

Centisome position: 12.91

GC content: 44.69

Gene sequence:

>1638_bases
TTGATTAAAGAAGTAATGGAGTCTCTTAGGAGAAATACACGTGGTTTAATAACATTAGACGTCTTAAACATGTTGACAAG
GCATCATAGAATACAGGGTAGTAGCGGTCTCGAGAACGCTTTAATGGATCTACGCGAAATACTTGAGGGGCTGGGCTACT
CTACACGGATGATAGAGATACCCAGCGATTCCAGAAAAGGATTCATCGACACCCCTGTTTCATGGGATATCGACGAAGCC
TTTCTACAATTCAAAACAGGGGGTAATGTGATAGAGGAGTATCGTTTTAATGAGCATCCAACACTTGTTGCAGCCCACTC
GCCCCCAGGGGAGGGATGTGGCGTTCTCTCCCTGTGCAGTGGAGGAAAATGTGAGGGTGAGGTGGTTTTAACTAAGGGCC
CTGCCTACGAGGCATATATTAAAGCAGATGCCAGGTTGGTGTTGGTCTATGATTCTAAGAGATATAGTGAGGCAGTACCT
TACATGGGGTTGTTCCTCCATAGTGATGAGGTGAAGGATAAGGTTGTGATGAATATACCGTATAAAACAACTCTTAAACT
AATGTCGATGCTGATAGAGAACCCTGGGAGGAAGATAGAGGTTTGCTGGAGCAGTAGGACAAGGTATACGGGTAAACCTA
TGCACGCACTTATTGCTTGTAATAAATACGAGGAGCCCGGTATAGTGCTTGTAAGCCATATATGTCACCCTAAACCGGGG
GCCCATGATAATGCCAGTGGTAGTGTCGTAAACTATATGGCGGCTTTCGCATCACGGTTAACCGGGTTGGAGGTACCTTT
ATGTCATGTATGGGTTCCAGAGCACACTGGGACTGTATTCCTCGATAACGCTCTACCGTGGCAGCCTCTTGGAGTAATCA
ACCTAGACATGGTGGGCTCTAAGCAATGGGTGACCGGGTCCACGCTCAACATAGTTAACACGCCATTATATATGGAGTCG
ATGATTACCCCCTACATGTATCTAGCTGTGAAAGCTGTATTTGATACAGCACAGTCATTCGGAGGCTTTAATCTACCAGG
GGTGAGATACTCGCTGTCACCGTATACTGTTGGAAGCGATCACGATATCTTTATTTCATGGGGGCTTGACACAGTCATGC
TTAACGAGTGGCCGAGTAAATACTATCATACAGACATGGATACCGTGGAGACTCTTTCACAACATTACCTACAGGAGACG
ACAGTGGCTTCACTACTGGCCGCGCTTCTAGCTTATAGGAAGCTCCATGGTAACGAGGTTTCCTCGGTGTTCAGGGATTA
TTTAAAAACATGGTATGCCATAGAAGCCGTTAAAACAGGCTTCGGCACCAGCCTGGGAGATCTATCAAGAGTGATCGATG
GATTCCCGAAGCTGAGGTCTGACAATATCGTAAAACTACCATCACCAATATCAACAAGGAGTATTCGGGGAATACTGGGA
TTTGAAACATATAAGAGGGTTTCAGAGATAAAGGGGGCTCTCACATATTTATCGCTCTATGCACCCTTAGCCTATGTTAA
CGGCTTAAATAATGTTGCACAATTATTCCAGGTTGAAAACCTGATTAAATGGAGCAGTGAGGAAGAAACATTAATCAATA
ACGCCTGGGAATTAATTAGAAATAAATTATTGAAGTGA

Upstream 100 bases:

>100_bases
CAACGACCATGTATATCTCCCTGGTATTATTTTTAATGGCCTGTCACACTTTATTATCTCTATAGATTATTAAGTATTAC
TTACATGGGGATTGACGAGT

Downstream 100 bases:

>100_bases
TAGATATGCCGGTTATCAGGGTAAGCATTAGCGATATAGAGGCCCTGCTGGGTAGTCGTGTTACATTGGAGAAATTGTAT
AAAGGGTTAACGAAGCTTAA

Product: aminopeptidases-like protein

Products: NA

Alternate protein names: Aminopeptidases-Like Protein; Peptidase M; Aminopeptidase Family; Protease-Associated PA Domain Protein; M28 Family Peptidase Zn-Dependent; Peptidase; Aminopeptidase

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA
FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP
YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG
AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES
MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET
TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG
FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK

Sequences:

>Translated_545_residues
MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA
FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP
YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG
AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES
MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET
TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG
FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK
>Mature_545_residues
MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA
FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP
YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG
AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES
MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET
TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG
FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60976; Mature: 60976

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEI
CHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PSDSRKGFIDTPVSWDIDEAFLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCS
CCCCCCCEECCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCEEEECC
GGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVPYMGLFLHSDEVKDKVVMNIP
CCCCCCEEEEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEEEECCCCCCEEEEECC
YKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC
AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGS
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCC
KQWVTGSTLNIVNTPLYMESMITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSD
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCC
HDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQETTVASLLAALLAYRKLHGNEV
CEEEEECCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH
FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NKLLK
HHHCC
>Mature Secondary Structure
MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEI
CHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PSDSRKGFIDTPVSWDIDEAFLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCS
CCCCCCCEECCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCEEEECC
GGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVPYMGLFLHSDEVKDKVVMNIP
CCCCCCEEEEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEEEECCCCCCEEEEECC
YKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC
AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGS
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCC
KQWVTGSTLNIVNTPLYMESMITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSD
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCC
HDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQETTVASLLAALLAYRKLHGNEV
CEEEEECCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
SSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH
FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NKLLK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA