| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883501
Identifier: 218883501
GI number: 218883501
Start: 176255
End: 177892
Strand: Direct
Name: 218883501
Synonym: DKAM_0188
Alternate gene names: NA
Gene position: 176255-177892 (Clockwise)
Preceding gene: 218883499
Following gene: 218883502
Centisome position: 12.91
GC content: 44.69
Gene sequence:
>1638_bases TTGATTAAAGAAGTAATGGAGTCTCTTAGGAGAAATACACGTGGTTTAATAACATTAGACGTCTTAAACATGTTGACAAG GCATCATAGAATACAGGGTAGTAGCGGTCTCGAGAACGCTTTAATGGATCTACGCGAAATACTTGAGGGGCTGGGCTACT CTACACGGATGATAGAGATACCCAGCGATTCCAGAAAAGGATTCATCGACACCCCTGTTTCATGGGATATCGACGAAGCC TTTCTACAATTCAAAACAGGGGGTAATGTGATAGAGGAGTATCGTTTTAATGAGCATCCAACACTTGTTGCAGCCCACTC GCCCCCAGGGGAGGGATGTGGCGTTCTCTCCCTGTGCAGTGGAGGAAAATGTGAGGGTGAGGTGGTTTTAACTAAGGGCC CTGCCTACGAGGCATATATTAAAGCAGATGCCAGGTTGGTGTTGGTCTATGATTCTAAGAGATATAGTGAGGCAGTACCT TACATGGGGTTGTTCCTCCATAGTGATGAGGTGAAGGATAAGGTTGTGATGAATATACCGTATAAAACAACTCTTAAACT AATGTCGATGCTGATAGAGAACCCTGGGAGGAAGATAGAGGTTTGCTGGAGCAGTAGGACAAGGTATACGGGTAAACCTA TGCACGCACTTATTGCTTGTAATAAATACGAGGAGCCCGGTATAGTGCTTGTAAGCCATATATGTCACCCTAAACCGGGG GCCCATGATAATGCCAGTGGTAGTGTCGTAAACTATATGGCGGCTTTCGCATCACGGTTAACCGGGTTGGAGGTACCTTT ATGTCATGTATGGGTTCCAGAGCACACTGGGACTGTATTCCTCGATAACGCTCTACCGTGGCAGCCTCTTGGAGTAATCA ACCTAGACATGGTGGGCTCTAAGCAATGGGTGACCGGGTCCACGCTCAACATAGTTAACACGCCATTATATATGGAGTCG ATGATTACCCCCTACATGTATCTAGCTGTGAAAGCTGTATTTGATACAGCACAGTCATTCGGAGGCTTTAATCTACCAGG GGTGAGATACTCGCTGTCACCGTATACTGTTGGAAGCGATCACGATATCTTTATTTCATGGGGGCTTGACACAGTCATGC TTAACGAGTGGCCGAGTAAATACTATCATACAGACATGGATACCGTGGAGACTCTTTCACAACATTACCTACAGGAGACG ACAGTGGCTTCACTACTGGCCGCGCTTCTAGCTTATAGGAAGCTCCATGGTAACGAGGTTTCCTCGGTGTTCAGGGATTA TTTAAAAACATGGTATGCCATAGAAGCCGTTAAAACAGGCTTCGGCACCAGCCTGGGAGATCTATCAAGAGTGATCGATG GATTCCCGAAGCTGAGGTCTGACAATATCGTAAAACTACCATCACCAATATCAACAAGGAGTATTCGGGGAATACTGGGA TTTGAAACATATAAGAGGGTTTCAGAGATAAAGGGGGCTCTCACATATTTATCGCTCTATGCACCCTTAGCCTATGTTAA CGGCTTAAATAATGTTGCACAATTATTCCAGGTTGAAAACCTGATTAAATGGAGCAGTGAGGAAGAAACATTAATCAATA ACGCCTGGGAATTAATTAGAAATAAATTATTGAAGTGA
Upstream 100 bases:
>100_bases CAACGACCATGTATATCTCCCTGGTATTATTTTTAATGGCCTGTCACACTTTATTATCTCTATAGATTATTAAGTATTAC TTACATGGGGATTGACGAGT
Downstream 100 bases:
>100_bases TAGATATGCCGGTTATCAGGGTAAGCATTAGCGATATAGAGGCCCTGCTGGGTAGTCGTGTTACATTGGAGAAATTGTAT AAAGGGTTAACGAAGCTTAA
Product: aminopeptidases-like protein
Products: NA
Alternate protein names: Aminopeptidases-Like Protein; Peptidase M; Aminopeptidase Family; Protease-Associated PA Domain Protein; M28 Family Peptidase Zn-Dependent; Peptidase; Aminopeptidase
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK
Sequences:
>Translated_545_residues MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK >Mature_545_residues MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEIPSDSRKGFIDTPVSWDIDEA FLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCSGGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVP YMGLFLHSDEVKDKVVMNIPYKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGSKQWVTGSTLNIVNTPLYMES MITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSDHDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQET TVASLLAALLAYRKLHGNEVSSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIRNKLLK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60976; Mature: 60976
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEI CHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC PSDSRKGFIDTPVSWDIDEAFLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCS CCCCCCCEECCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCEEEECC GGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVPYMGLFLHSDEVKDKVVMNIP CCCCCCEEEEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEEEECCCCCCEEEEECC YKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGS CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCC KQWVTGSTLNIVNTPLYMESMITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSD CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCC HDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQETTVASLLAALLAYRKLHGNEV CEEEEECCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH SSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NKLLK HHHCC >Mature Secondary Structure MIKEVMESLRRNTRGLITLDVLNMLTRHHRIQGSSGLENALMDLREILEGLGYSTRMIEI CHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC PSDSRKGFIDTPVSWDIDEAFLQFKTGGNVIEEYRFNEHPTLVAAHSPPGEGCGVLSLCS CCCCCCCEECCCCCCCHHHHHHEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCEEEECC GGKCEGEVVLTKGPAYEAYIKADARLVLVYDSKRYSEAVPYMGLFLHSDEVKDKVVMNIP CCCCCCEEEEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCEEEEECCCCCCEEEEECC YKTTLKLMSMLIENPGRKIEVCWSSRTRYTGKPMHALIACNKYEEPGIVLVSHICHPKPG HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCC AHDNASGSVVNYMAAFASRLTGLEVPLCHVWVPEHTGTVFLDNALPWQPLGVINLDMVGS CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCC KQWVTGSTLNIVNTPLYMESMITPYMYLAVKAVFDTAQSFGGFNLPGVRYSLSPYTVGSD CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCC HDIFISWGLDTVMLNEWPSKYYHTDMDTVETLSQHYLQETTVASLLAALLAYRKLHGNEV CEEEEECCCCEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH SSVFRDYLKTWYAIEAVKTGFGTSLGDLSRVIDGFPKLRSDNIVKLPSPISTRSIRGILG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH FETYKRVSEIKGALTYLSLYAPLAYVNGLNNVAQLFQVENLIKWSSEEETLINNAWELIR HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NKLLK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA