Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883443

Identifier: 218883443

GI number: 218883443

Start: 117738

End: 118676

Strand: Reverse

Name: 218883443

Synonym: DKAM_0129

Alternate gene names: NA

Gene position: 118676-117738 (Counterclockwise)

Preceding gene: 218883444

Following gene: 218883442

Centisome position: 8.69

GC content: 39.4

Gene sequence:

>939_bases
ATGATAGTAAATATAGATGTGGCTAGCAGAGTTCTCAACAGGATACTTCTTAAATATCTCTCAGTATCCAGGGGAAGTCT
AATAGCTAGGATGGCCTTCACCAATGAAGGAGAGCTGTTCAAATATCTGAAGGATACATGTAGAAATACTATATGTATAG
CATTAATTCATGCTGGAAACGTGAACGGCGAGATATATGTTACGCAGGAAAATATAGTGGCCAGCTACCTCGAGATTGGG
GGAGAGCAATTGAATGGCGTCAACGCATTGAATAAGCTTAAAGAACTTAACAATGGGTATGTTGAAGTATATAGCTTTAA
CCCCCAGGTTATAAGCTATATACATAAACACATTGATACATTGATAAAGGAGGTAAGAAGCGAGGCTAAAACATCTGGCA
AAATAATGACGTCTATGAATACTATTCTAAGATTAATAGACATCCCCTGCTACATCAATGAACTAGAATTCATGAATGGA
GAGGAAATGATTTACGTCGATGCTGCATGTAACGATGAAGATCTTACATTATATATCATTCTTATATTACTCAGATTGCT
CGACTCATACTCTATAGCTCCCTCGGTGATCAATTATTCTGTAAGACTGAAAACCCTGGAGCAAGGAATTATAAAGGAGA
AAATAGTGAAAAAATATCTGGAAATCCCTGATGATACAACCAGGATGATATACCTTGAGCTACCAATGATTCTCGCATCA
GTTGGCTCACACCTCCTCAACATTGAAATAAAGAGGCAGCGTGGAAAGATCATCCTCACCATTGAGGCTACACCACCTAT
ATTTACCATGGAACCCGACGAGCTAGCCTCGAGGATCTATAATGCTCTTAGCAGATACATCAGTAAACTCGAGGTCAACG
TGGAATATACAGTGAAAACTCCCGTGGGTCCAGTGAAAACTAGGGGTAAAGCCCCCTAA

Upstream 100 bases:

>100_bases
CCTGGTTCAGTCAACTATAGCCAAAATTTATAACTGGACAATGATATAATATACGAATAAGCCTGGTTTTAGGAATGCTG
GTTATCATGGGGACCAGGTA

Downstream 100 bases:

>100_bases
AACCATCACATTGTTCACGACCCTCAACAATAAACTTTAATAATTATCCGGGGGAATTAATATTGTCTGTATTAAAGTGA
TTAGGATAAACCAATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIVNIDVASRVLNRILLKYLSVSRGSLIARMAFTNEGELFKYLKDTCRNTICIALIHAGNVNGEIYVTQENIVASYLEIG
GEQLNGVNALNKLKELNNGYVEVYSFNPQVISYIHKHIDTLIKEVRSEAKTSGKIMTSMNTILRLIDIPCYINELEFMNG
EEMIYVDAACNDEDLTLYIILILLRLLDSYSIAPSVINYSVRLKTLEQGIIKEKIVKKYLEIPDDTTRMIYLELPMILAS
VGSHLLNIEIKRQRGKIILTIEATPPIFTMEPDELASRIYNALSRYISKLEVNVEYTVKTPVGPVKTRGKAP

Sequences:

>Translated_312_residues
MIVNIDVASRVLNRILLKYLSVSRGSLIARMAFTNEGELFKYLKDTCRNTICIALIHAGNVNGEIYVTQENIVASYLEIG
GEQLNGVNALNKLKELNNGYVEVYSFNPQVISYIHKHIDTLIKEVRSEAKTSGKIMTSMNTILRLIDIPCYINELEFMNG
EEMIYVDAACNDEDLTLYIILILLRLLDSYSIAPSVINYSVRLKTLEQGIIKEKIVKKYLEIPDDTTRMIYLELPMILAS
VGSHLLNIEIKRQRGKIILTIEATPPIFTMEPDELASRIYNALSRYISKLEVNVEYTVKTPVGPVKTRGKAP
>Mature_312_residues
MIVNIDVASRVLNRILLKYLSVSRGSLIARMAFTNEGELFKYLKDTCRNTICIALIHAGNVNGEIYVTQENIVASYLEIG
GEQLNGVNALNKLKELNNGYVEVYSFNPQVISYIHKHIDTLIKEVRSEAKTSGKIMTSMNTILRLIDIPCYINELEFMNG
EEMIYVDAACNDEDLTLYIILILLRLLDSYSIAPSVINYSVRLKTLEQGIIKEKIVKKYLEIPDDTTRMIYLELPMILAS
VGSHLLNIEIKRQRGKIILTIEATPPIFTMEPDELASRIYNALSRYISKLEVNVEYTVKTPVGPVKTRGKAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35311; Mature: 35311

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNIDVASRVLNRILLKYLSVSRGSLIARMAFTNEGELFKYLKDTCRNTICIALIHAGN
CEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECC
VNGEIYVTQENIVASYLEIGGEQLNGVNALNKLKELNNGYVEVYSFNPQVISYIHKHIDT
CCCEEEEEHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
LIKEVRSEAKTSGKIMTSMNTILRLIDIPCYINELEFMNGEEMIYVDAACNDEDLTLYII
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCHHHCCCCCEEEEEEECCCCCCHHHHHH
LILLRLLDSYSIAPSVINYSVRLKTLEQGIIKEKIVKKYLEIPDDTTRMIYLELPMILAS
HHHHHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
VGSHLLNIEIKRQRGKIILTIEATPPIFTMEPDELASRIYNALSRYISKLEVNVEYTVKT
HCCHHEEEEEEECCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
PVGPVKTRGKAP
CCCCCCCCCCCC
>Mature Secondary Structure
MIVNIDVASRVLNRILLKYLSVSRGSLIARMAFTNEGELFKYLKDTCRNTICIALIHAGN
CEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEEEECC
VNGEIYVTQENIVASYLEIGGEQLNGVNALNKLKELNNGYVEVYSFNPQVISYIHKHIDT
CCCEEEEEHHHHHHHHHHHCCHHCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
LIKEVRSEAKTSGKIMTSMNTILRLIDIPCYINELEFMNGEEMIYVDAACNDEDLTLYII
HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCHHHCCCCCEEEEEEECCCCCCHHHHHH
LILLRLLDSYSIAPSVINYSVRLKTLEQGIIKEKIVKKYLEIPDDTTRMIYLELPMILAS
HHHHHHHCCCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
VGSHLLNIEIKRQRGKIILTIEATPPIFTMEPDELASRIYNALSRYISKLEVNVEYTVKT
HCCHHEEEEEEECCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
PVGPVKTRGKAP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA