Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883419

Identifier: 218883419

GI number: 218883419

Start: 90292

End: 90999

Strand: Direct

Name: 218883419

Synonym: DKAM_0105

Alternate gene names: NA

Gene position: 90292-90999 (Clockwise)

Preceding gene: 218883414

Following gene: 218883420

Centisome position: 6.61

GC content: 43.5

Gene sequence:

>708_bases
ATGAGTGGAGATAGTAAGAGAGAGATAAGGATATTGATAAACGAGGAGCTCTATAAGAGTTTAGAGAAGAAGGCTTTAGA
GCTAGGCTTCAAGGATGTCTCAAGCTACATCATTGAAGTACTTTCCAGGGAACTATTATCGATGACCGAGAAAACCGGGG
TGGAAGAACTAGAGAGGATGCGTTCCCGCCTCGAAAAATTCATCCAGGATGAAATCAATAAAGGCTTGGCACCCCTTGAA
AACATGAGGCGCCAGCTGGCTGAGCTGATTCAAAGAGTTGACGAATTAGAGGAAAAGATAAAGAGTATTGAGGGTAAGGA
GGGTGCTAAACCGGGTGAGACACGTGGTGAAGGTAAGGTTGGCAAACCATATAAGACCGGGATAGAGAGGCTCCGCGAGG
ACAAAATAGTGTTTGAAAGCATGTTACCAGCTAGAATACAACGTGATAGGCTTTTCTCATACTTCGAGAGAATGGGGGCT
GTGGTACTTCATTTAAGCAAGGAGAGAATCGCTGTCGACAGCGAGTTTTGGAATGAGTTCAAGGAGAAGCTGTTTAAAGA
GGCCAAGACTAATACCGAGGAGGACTTGAAGAAGATACTTGGTGAAAAAGGATATTTGCTCTGGAAAGCCTTATATGAGG
ATAACATGATTCTATATGACTCTAAGACCCGTAGTTGGAAGCCTGTCTCAGATGAAGTAAGAAAGTAA

Upstream 100 bases:

>100_bases
TATTTTAGGACTGGTGAATGATCGCTCTAGGGAAGTGTTTTAAGGTATAAGGTATCTTGATATAAAGCCGGCATAAATAA
TATATTCTCAGGTTTAAACC

Downstream 100 bases:

>100_bases
GCGGGGATACTGGTTCATGCTGTCTACAGGTAATTATGCCAGGCTACTTGAATCCATTAATATACGGGAGAACGGTGCCA
TAATACTGGGTGAAAACATA

Product: CopG domain-containing protein DNA-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSGDSKREIRILINEELYKSLEKKALELGFKDVSSYIIEVLSRELLSMTEKTGVEELERMRSRLEKFIQDEINKGLAPLE
NMRRQLAELIQRVDELEEKIKSIEGKEGAKPGETRGEGKVGKPYKTGIERLREDKIVFESMLPARIQRDRLFSYFERMGA
VVLHLSKERIAVDSEFWNEFKEKLFKEAKTNTEEDLKKILGEKGYLLWKALYEDNMILYDSKTRSWKPVSDEVRK

Sequences:

>Translated_235_residues
MSGDSKREIRILINEELYKSLEKKALELGFKDVSSYIIEVLSRELLSMTEKTGVEELERMRSRLEKFIQDEINKGLAPLE
NMRRQLAELIQRVDELEEKIKSIEGKEGAKPGETRGEGKVGKPYKTGIERLREDKIVFESMLPARIQRDRLFSYFERMGA
VVLHLSKERIAVDSEFWNEFKEKLFKEAKTNTEEDLKKILGEKGYLLWKALYEDNMILYDSKTRSWKPVSDEVRK
>Mature_234_residues
SGDSKREIRILINEELYKSLEKKALELGFKDVSSYIIEVLSRELLSMTEKTGVEELERMRSRLEKFIQDEINKGLAPLEN
MRRQLAELIQRVDELEEKIKSIEGKEGAKPGETRGEGKVGKPYKTGIERLREDKIVFESMLPARIQRDRLFSYFERMGAV
VLHLSKERIAVDSEFWNEFKEKLFKEAKTNTEEDLKKILGEKGYLLWKALYEDNMILYDSKTRSWKPVSDEVRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27601; Mature: 27470

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDSKREIRILINEELYKSLEKKALELGFKDVSSYIIEVLSRELLSMTEKTGVEELERM
CCCCCCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RSRLEKFIQDEINKGLAPLENMRRQLAELIQRVDELEEKIKSIEGKEGAKPGETRGEGKV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKPYKTGIERLREDKIVFESMLPARIQRDRLFSYFERMGAVVLHLSKERIAVDSEFWNEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKLFKEAKTNTEEDLKKILGEKGYLLWKALYEDNMILYDSKTRSWKPVSDEVRK
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHCC
>Mature Secondary Structure 
SGDSKREIRILINEELYKSLEKKALELGFKDVSSYIIEVLSRELLSMTEKTGVEELERM
CCCCCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RSRLEKFIQDEINKGLAPLENMRRQLAELIQRVDELEEKIKSIEGKEGAKPGETRGEGKV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GKPYKTGIERLREDKIVFESMLPARIQRDRLFSYFERMGAVVLHLSKERIAVDSEFWNEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKLFKEAKTNTEEDLKKILGEKGYLLWKALYEDNMILYDSKTRSWKPVSDEVRK
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA