Click here to switch to the map view.

The map label for this gene is 218883418

Identifier: 218883418

GI number: 218883418

Start: 89677

End: 90114

Strand: Reverse

Name: 218883418

Synonym: DKAM_0104

Alternate gene names: NA

Gene position: 90114-89677 (Counterclockwise)

Preceding gene: 218883422

Following gene: 218883417

Centisome position: 6.6

GC content: 50.91

Gene sequence:

>438_bases
ATGGCTGATCTACTTGTATGGGAAAAACCCGACTTAAATACTTTACCCGGTGTAATTAAGAAGGCCATAGTTGAAGGGAG
GGTAGTTATTATTATTGGCGAATGCAGCATTGAGTACGAGGGTAGAAGTGCATCTAGGCTTGGAAACGGTGAGAGGATAC
TGATTATAAAGCAGGATGGCTCCGTTCTAGTACATCGCCCCCAAGGATACTCACCCGTTAACTGGCAACCAGAGACATCA
GTAATAGAGGTCTGGACCGATGACGAGGTTATAGAGGACAAGCGCACGGGTTGCAGGGCGTGTGTCAACGTGACTGGCTG
CCCAACACTCTACATCGAGGACGGGAAGGCGAAGATCGTGGAGGACGACTGCACAGGCTGCGGTCTGTGCGCTAGGTTCT
GCCCGTACAAGGCTATAGTCGAGGTGAGTGGGGCTTGA

Upstream 100 bases:

>100_bases
GATCATTCACCAGTCCTAAAATACCCTTAAACCATGGGAGAAATATTGCCTGATCGATGCTGGGTGATACTGGTAAGCCC
AGTGAAATGGTGATGTATAT

Downstream 100 bases:

>100_bases
GCAGGGTGTTCAACATCCTCATATCCTCGGTAGGCGGGCAGAGCGGGCTGACGCTGTCGAGGATAATGGCCGTGGCCGCT
GTGAGGCAGGGGCTCAGCGC

Product: indolepyruvate ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MADLLVWEKPDLNTLPGVIKKAIVEGRVVIIIGECSIEYEGRSASRLGNGERILIIKQDGSVLVHRPQGYSPVNWQPETS
VIEVWTDDEVIEDKRTGCRACVNVTGCPTLYIEDGKAKIVEDDCTGCGLCARFCPYKAIVEVSGA

Sequences:

>Translated_145_residues
MADLLVWEKPDLNTLPGVIKKAIVEGRVVIIIGECSIEYEGRSASRLGNGERILIIKQDGSVLVHRPQGYSPVNWQPETS
VIEVWTDDEVIEDKRTGCRACVNVTGCPTLYIEDGKAKIVEDDCTGCGLCARFCPYKAIVEVSGA
>Mature_144_residues
ADLLVWEKPDLNTLPGVIKKAIVEGRVVIIIGECSIEYEGRSASRLGNGERILIIKQDGSVLVHRPQGYSPVNWQPETSV
IEVWTDDEVIEDKRTGCRACVNVTGCPTLYIEDGKAKIVEDDCTGCGLCARFCPYKAIVEVSGA

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002793 [H]

Pfam domain/function: PF01939 DUF91 [H]

EC number: NA

Molecular weight: Translated: 15853; Mature: 15722

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLLVWEKPDLNTLPGVIKKAIVEGRVVIIIGECSIEYEGRSASRLGNGERILIIKQDG
CCCCEEECCCCCCCHHHHHHHHHHCCEEEEEEECEEEEECCCCHHHCCCCCEEEEEECCC
SVLVHRPQGYSPVNWQPETSVIEVWTDDEVIEDKRTGCRACVNVTGCPTLYIEDGKAKIV
CEEEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEECCCCCEEEEECCCEEEE
EDDCTGCGLCARFCPYKAIVEVSGA
ECCCCCCCHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
ADLLVWEKPDLNTLPGVIKKAIVEGRVVIIIGECSIEYEGRSASRLGNGERILIIKQDG
CCCEEECCCCCCCHHHHHHHHHHCCEEEEEEECEEEEECCCCHHHCCCCCEEEEEECCC
SVLVHRPQGYSPVNWQPETSVIEVWTDDEVIEDKRTGCRACVNVTGCPTLYIEDGKAKIV
CEEEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEECCCCCEEEEECCCEEEE
EDDCTGCGLCARFCPYKAIVEVSGA
ECCCCCCCHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]