| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883416
Identifier: 218883416
GI number: 218883416
Start: 89069
End: 89335
Strand: Reverse
Name: 218883416
Synonym: DKAM_0102
Alternate gene names: NA
Gene position: 89335-89069 (Counterclockwise)
Preceding gene: 218883417
Following gene: 218883415
Centisome position: 6.54
GC content: 63.3
Gene sequence:
>267_bases ATGAAGAGCGTCCTAAGGTCGCTGAAAGAGGTTGTGGGCGAGAAGCTCCTAGTGGTCCCCGCCAGGGACCTAGCAGTGAG GGCCGGCTCGGCCAGGGCCATTAACGTGGTTATGCTGGGGGTCTTCAACGCGCACGCACGCCTCTTCGCCGACGACGTCG TGTACGAGGCTATCAAGAGCGTGCTCCCGGGGAGGGCGGGAGAGGTCTCTGTCAAGGCCTACGAGCTGGGCAAGGCCTTC TACGCAGAGAGGGCGAAGAGCGCCTGA
Upstream 100 bases:
>100_bases GCGAGCTACGAGGTACCTCCGCGACACCGGAGTTGTCTTCGCAGCCGACGAGTACAAGCCGCCGGTCAGCGCCAGCCTCA GCCCTAGCCCGGCCTGAGCG
Downstream 100 bases:
>100_bases CCCCGGGTGGTAGTGTCTGGGGCAGAAACGTTTATTAAGGTCATTGAGGAAATTTTATAAACAGTTGGGATCGAATGTTG GAGAGGTTGTTGAAGCCTGC
Product: Indolepyruvate oxidoreductase subunit iorB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MKSVLRSLKEVVGEKLLVVPARDLAVRAGSARAINVVMLGVFNAHARLFADDVVYEAIKSVLPGRAGEVSVKAYELGKAF YAERAKSA
Sequences:
>Translated_88_residues MKSVLRSLKEVVGEKLLVVPARDLAVRAGSARAINVVMLGVFNAHARLFADDVVYEAIKSVLPGRAGEVSVKAYELGKAF YAERAKSA >Mature_88_residues MKSVLRSLKEVVGEKLLVVPARDLAVRAGSARAINVVMLGVFNAHARLFADDVVYEAIKSVLPGRAGEVSVKAYELGKAF YAERAKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9445; Mature: 9445
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVLRSLKEVVGEKLLVVPARDLAVRAGSARAINVVMLGVFNAHARLFADDVVYEAIKS CHHHHHHHHHHHCCCEEEEECCHHHEECCCCCEEHHHEEEHHHHHHHHHHHHHHHHHHHH VLPGRAGEVSVKAYELGKAFYAERAKSA HCCCCCCCEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSVLRSLKEVVGEKLLVVPARDLAVRAGSARAINVVMLGVFNAHARLFADDVVYEAIKS CHHHHHHHHHHHCCCEEEEECCHHHEECCCCCEEHHHEEEHHHHHHHHHHHHHHHHHHHH VLPGRAGEVSVKAYELGKAFYAERAKSA HCCCCCCCEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA