Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883399

Identifier: 218883399

GI number: 218883399

Start: 77550

End: 78581

Strand: Direct

Name: 218883399

Synonym: DKAM_0085

Alternate gene names: NA

Gene position: 77550-78581 (Clockwise)

Preceding gene: 218883398

Following gene: 218883400

Centisome position: 5.68

GC content: 37.98

Gene sequence:

>1032_bases
ATGGGAGCCTTGAAATTCACTAAAACGATCACTCTAGTAATTATAGTGTTAGTTGGCATCATCTTAATATCACACGTGGT
TACGGACATGTTTGTGAATAAGCGTACCATGGTTGATGAGGGTGTTCATGATACTGGTATGACTAGCAGGTTTAATATCT
ATAGTGAGGATAGAGCTGGTATACTCCTTCCAACGGTTCAATTTAAGTTAAGTAATGGAAGCGTGTTGGTTGTCCATAAA
AGGAATCCATTTGAATTTGATATAGATGCTGAGTTAAGCACTAGTATGGTAATACCACAGTACCTAAGGGTGTTTAGAGT
AAGGCTATATAATAGCTCACAAGACGTATTTAATTTAGCTTCGAAACTGGGTATCAACACTGTTAAGCTCTACTACAATG
AGAAAACTAAGCAGTACATATTCCATAATGCTACACATGTGTTTGAGTACTCTGCGGAGAATGGTTTTCTAAGATTTGAG
TTAAGAGAAACTCCTTCTAGTGATGTTAGTTTATTTCCGTCTGATGATATTCTTATTAAGAAAGCTATAGATTTTCTCAA
GGAACGAGGATTACTATACTTCTCAGAGTATGAGGTTAGAGTTGGGAGTTACCTAGTTGCCAACGGGGTTATCTTAGTAA
AAGCTGTAGTAATCAACGCTAAACTAGATGGTATTACTGTTGACAACCTTGGACTTGTCGTTCTGATGAACTCAAAAGGT
GACATTATTGGAGTGGAGGGTACAATCTTAGCTGATGTGTATGCTGTAGGAGAATACAGGGTTAAACCAGTAAACGAGCT
GATGATGGAGTTGAAGAGGAAGATAGCTAGAGGGGAGCCTATGACCGATTGGTATATAAGCTGGTTAGCATTCACAAAAC
TACGTATAACAGATTTAACACTACGATATTATATGACCTATGATGGTTACTTAGTACCGGTCTACATTATGAAGGGCTAC
TATGAACTAGACTATGACACTATAAGGGATAGTGGGGAGATACAGGGATTGATGGTGGCTATCAAAGGTTAA

Upstream 100 bases:

>100_bases
AGCGGACAATGACTTCATAGACTACTTTAATAGGTATACCGATGTGGACAATATAAAGCTAATTATAACAGCTTACATAC
CATAATATTGGGGTGAGCTT

Downstream 100 bases:

>100_bases
AATCACGTAAATTGATATTTGTAACGCACCCCCTATTTTTACCCTTATTCCTTATGACAAGTAGATCCATTATTCTCAGC
GATCTAGACTTGTCTAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MGALKFTKTITLVIIVLVGIILISHVVTDMFVNKRTMVDEGVHDTGMTSRFNIYSEDRAGILLPTVQFKLSNGSVLVVHK
RNPFEFDIDAELSTSMVIPQYLRVFRVRLYNSSQDVFNLASKLGINTVKLYYNEKTKQYIFHNATHVFEYSAENGFLRFE
LRETPSSDVSLFPSDDILIKKAIDFLKERGLLYFSEYEVRVGSYLVANGVILVKAVVINAKLDGITVDNLGLVVLMNSKG
DIIGVEGTILADVYAVGEYRVKPVNELMMELKRKIARGEPMTDWYISWLAFTKLRITDLTLRYYMTYDGYLVPVYIMKGY
YELDYDTIRDSGEIQGLMVAIKG

Sequences:

>Translated_343_residues
MGALKFTKTITLVIIVLVGIILISHVVTDMFVNKRTMVDEGVHDTGMTSRFNIYSEDRAGILLPTVQFKLSNGSVLVVHK
RNPFEFDIDAELSTSMVIPQYLRVFRVRLYNSSQDVFNLASKLGINTVKLYYNEKTKQYIFHNATHVFEYSAENGFLRFE
LRETPSSDVSLFPSDDILIKKAIDFLKERGLLYFSEYEVRVGSYLVANGVILVKAVVINAKLDGITVDNLGLVVLMNSKG
DIIGVEGTILADVYAVGEYRVKPVNELMMELKRKIARGEPMTDWYISWLAFTKLRITDLTLRYYMTYDGYLVPVYIMKGY
YELDYDTIRDSGEIQGLMVAIKG
>Mature_342_residues
GALKFTKTITLVIIVLVGIILISHVVTDMFVNKRTMVDEGVHDTGMTSRFNIYSEDRAGILLPTVQFKLSNGSVLVVHKR
NPFEFDIDAELSTSMVIPQYLRVFRVRLYNSSQDVFNLASKLGINTVKLYYNEKTKQYIFHNATHVFEYSAENGFLRFEL
RETPSSDVSLFPSDDILIKKAIDFLKERGLLYFSEYEVRVGSYLVANGVILVKAVVINAKLDGITVDNLGLVVLMNSKGD
IIGVEGTILADVYAVGEYRVKPVNELMMELKRKIARGEPMTDWYISWLAFTKLRITDLTLRYYMTYDGYLVPVYIMKGYY
ELDYDTIRDSGEIQGLMVAIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39045; Mature: 38914

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALKFTKTITLVIIVLVGIILISHVVTDMFVNKRTMVDEGVHDTGMTSRFNIYSEDRAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCC
ILLPTVQFKLSNGSVLVVHKRNPFEFDIDAELSTSMVIPQYLRVFRVRLYNSSQDVFNLA
EEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCEECHHHHHHHHHEEECCCHHHHHHH
SKLGINTVKLYYNEKTKQYIFHNATHVFEYSAENGFLRFELRETPSSDVSLFPSDDILIK
HHCCCEEEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCHHHH
KAIDFLKERGLLYFSEYEVRVGSYLVANGVILVKAVVINAKLDGITVDNLGLVVLMNSKG
HHHHHHHHCCCEEEEEEEEEECCEEECCCEEEEEEEEEEEEECCEEECCCCEEEEECCCC
DIIGVEGTILADVYAVGEYRVKPVNELMMELKRKIARGEPMTDWYISWLAFTKLRITDLT
CEEEECCEEEEEEEEECCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEE
LRYYMTYDGYLVPVYIMKGYYELDYDTIRDSGEIQGLMVAIKG
EEEEEEECCEEEEEEEECCEEEECHHHCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
GALKFTKTITLVIIVLVGIILISHVVTDMFVNKRTMVDEGVHDTGMTSRFNIYSEDRAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCCCC
ILLPTVQFKLSNGSVLVVHKRNPFEFDIDAELSTSMVIPQYLRVFRVRLYNSSQDVFNLA
EEEEEEEEEECCCCEEEEECCCCEEEEECCCCCCCEECHHHHHHHHHEEECCCHHHHHHH
SKLGINTVKLYYNEKTKQYIFHNATHVFEYSAENGFLRFELRETPSSDVSLFPSDDILIK
HHCCCEEEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEECCCCCHHHH
KAIDFLKERGLLYFSEYEVRVGSYLVANGVILVKAVVINAKLDGITVDNLGLVVLMNSKG
HHHHHHHHCCCEEEEEEEEEECCEEECCCEEEEEEEEEEEEECCEEECCCCEEEEECCCC
DIIGVEGTILADVYAVGEYRVKPVNELMMELKRKIARGEPMTDWYISWLAFTKLRITDLT
CEEEECCEEEEEEEEECCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEE
LRYYMTYDGYLVPVYIMKGYYELDYDTIRDSGEIQGLMVAIKG
EEEEEEECCEEEEEEEECCEEEECHHHCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]