| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883396
Identifier: 218883396
GI number: 218883396
Start: 73131
End: 75182
Strand: Direct
Name: 218883396
Synonym: DKAM_0082
Alternate gene names: NA
Gene position: 73131-75182 (Clockwise)
Preceding gene: 218883395
Following gene: 218883397
Centisome position: 5.36
GC content: 47.42
Gene sequence:
>2052_bases ATGGCGCTCATCTTGGCGCTGATAGCTGGATTAACCACACTGCATGCTGGGGTTTTTAGCTACAGAATTATGAGCAACTC TGTAGTAGTACAGCCGCTAAACCTGGTCTCTATAACGTATCCGCCACAGAACTTGACCTGCACAGGACTATCTAAAATAA TAAGCGGCTTCTATTACCAAGAATCCTTCGAGAGTATACCACTCAATTGGGTAGTAATCAATGCAACGCCCACGCCCAAG GGATTCATTGGACCAGGCGGGTATTGGAGTATCGTTGACGGCGGGTATGCGGGTAAGGCTATAAGAGGGTACCCCCTGCT GTGGCAGGTGAGAGAACACAAAACTTATACCATTTATAATCCCGACACGAGGTTTCTTCCACAAACGTCAAACGCCATTA GGATAGATAGCTATCAGGCCGGCAACACTCCTATAGGAAACGGGTATCTACTGTTAATAGCGCCTATAGAGTTGCTCAAT AACACAGTCGTAGGTACACGTCTCGATGTATACTTCTCTTGGAATCGGAGGACCGTTGGCTATATAGACCTCGTAAACGC GACCATAGATAGAAGAGACGACGCGGTAATCTTCAGCACGTACAATGACGTCCCTCCCTACTGGAGGAAGTACGGAACCC CCAGCTATATAGGAATAGCGGAGATATACAAGGCAAGGGGTGGAACAACAAGTTATAACTTCAACAGCACCCTCCTTCAG CTACAGGGTTACGGGCCCTACATGACCTACGCGATAACGATGACAGATTACTGGAATCGACAAACCCTCTACTTTGACGT TTACTGGATCGCCTTGTACGACTCTACGGGTTCACTAATCTACAACTTCACTTTTCCCTACGGTAAATACAGCGTCGTGA TGGAGAGAAGTGGTACAACTGGAGACTACGGTTACTTGAACTTTGGATTTCCAGGCTTTACTGCTATGTACTACAACAGA GACATTAGCAGCTACGCGGTTTACACGGGTGTCCAGGTCTCGACCCTCCTAAATATAAGAGGTGGAGTCGGATGGGGCTC GGTAATACTTACTGATAGGGTCAACAACTACTACGCATTCGCACTGAATACAAGCGGCTACCTCAATATATTGAGGAATG CGGGTACTGGGTGGTCTGTTTTAAAAAGCGCACTAGTACCCGGATATACCAACAGTACATGGTATAAACTGACAGTGACG TACTCCAGGGTAGGGACAACTAATTACTTTAGCGTTTACCTATATGACGTGTCGGGTAACCTAGTTACTCAGTTGAGTGC TTCCGACGACTTCTTCCAGCCGGTATTCGCTGGTCTAGGAAGCTACACATCTAACCTCTTATACGTAGACGTACTCTACG ACAACTTTATAATCGGACAGCCTGCGATTACTTTGATAAATGCCCCTGGAGCAAACTACGTAGGGGAGCTTTGGAGTCTC TCTGACGTATTGGTATCGAGTGGGGTAAGTGACGCTAGCGGTATAATACGGCTTCCGGTAGACCCCGCGACAACAATGAA CGGCGGGGTGTTCAAGGTCTACTACCCTAATAACGTGGCCTGCCTCGCCACTCAATACCCGTCAACCGAAGTTATCAGAG CTGGCGACGTCTATAACGTATTGTGGAAACCCATATACTTGGATCCTAGCCTACTAAACGTTATGTTCTACATCGGCTAT GGGGCAAATACCACCTATGCGCCAATATTTAACGTGTCCATCTATAGTGGCTACTCGGCCTATGCCTATCTCCTTTTAGA TACTTCAGCGAGCGTCATCGACCCGGGCTTGAGCATCAATATATTGCTCATTAACTCTAGTGGGGCCGTCTCGGGGAAGA TTATTATATCTAGTGGGGCAGTACTGTCCAGTCAAACATCCCCCTCAATTTTAGTTGCCGGATCTAGTAGTTACGTCTAC ATCGAGGGGGGATACTCAGCGCCAAGGTCTAGTAGCTCGCTAATGATCTATATGGTTGCTTGCGGTTCTCCTACACTGGC AGCCTGTATTTACATACCTGTTCAACTAGTAGTCATGTCGCCCGACACGTGA
Upstream 100 bases:
>100_bases ACAGCGTTCTAGCCGTAAGTAAGTCGAGCAAGTACGCTACTACAAACCGCGAAAACACTGAAGGCAGGGGTGCAACTACT TGAAGCGCGTACTTGCCGCA
Downstream 100 bases:
>100_bases TATAGATAAACCCGAAAGTCGGTCACTCTAGGGCAGCACTGACTCTACTACTGGGTTTGTCAATCGCTCTACTGATTGTA GTGACTATTGCCTTTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MALILALIAGLTTLHAGVFSYRIMSNSVVVQPLNLVSITYPPQNLTCTGLSKIISGFYYQESFESIPLNWVVINATPTPK GFIGPGGYWSIVDGGYAGKAIRGYPLLWQVREHKTYTIYNPDTRFLPQTSNAIRIDSYQAGNTPIGNGYLLLIAPIELLN NTVVGTRLDVYFSWNRRTVGYIDLVNATIDRRDDAVIFSTYNDVPPYWRKYGTPSYIGIAEIYKARGGTTSYNFNSTLLQ LQGYGPYMTYAITMTDYWNRQTLYFDVYWIALYDSTGSLIYNFTFPYGKYSVVMERSGTTGDYGYLNFGFPGFTAMYYNR DISSYAVYTGVQVSTLLNIRGGVGWGSVILTDRVNNYYAFALNTSGYLNILRNAGTGWSVLKSALVPGYTNSTWYKLTVT YSRVGTTNYFSVYLYDVSGNLVTQLSASDDFFQPVFAGLGSYTSNLLYVDVLYDNFIIGQPAITLINAPGANYVGELWSL SDVLVSSGVSDASGIIRLPVDPATTMNGGVFKVYYPNNVACLATQYPSTEVIRAGDVYNVLWKPIYLDPSLLNVMFYIGY GANTTYAPIFNVSIYSGYSAYAYLLLDTSASVIDPGLSINILLINSSGAVSGKIIISSGAVLSSQTSPSILVAGSSSYVY IEGGYSAPRSSSSLMIYMVACGSPTLAACIYIPVQLVVMSPDT
Sequences:
>Translated_683_residues MALILALIAGLTTLHAGVFSYRIMSNSVVVQPLNLVSITYPPQNLTCTGLSKIISGFYYQESFESIPLNWVVINATPTPK GFIGPGGYWSIVDGGYAGKAIRGYPLLWQVREHKTYTIYNPDTRFLPQTSNAIRIDSYQAGNTPIGNGYLLLIAPIELLN NTVVGTRLDVYFSWNRRTVGYIDLVNATIDRRDDAVIFSTYNDVPPYWRKYGTPSYIGIAEIYKARGGTTSYNFNSTLLQ LQGYGPYMTYAITMTDYWNRQTLYFDVYWIALYDSTGSLIYNFTFPYGKYSVVMERSGTTGDYGYLNFGFPGFTAMYYNR DISSYAVYTGVQVSTLLNIRGGVGWGSVILTDRVNNYYAFALNTSGYLNILRNAGTGWSVLKSALVPGYTNSTWYKLTVT YSRVGTTNYFSVYLYDVSGNLVTQLSASDDFFQPVFAGLGSYTSNLLYVDVLYDNFIIGQPAITLINAPGANYVGELWSL SDVLVSSGVSDASGIIRLPVDPATTMNGGVFKVYYPNNVACLATQYPSTEVIRAGDVYNVLWKPIYLDPSLLNVMFYIGY GANTTYAPIFNVSIYSGYSAYAYLLLDTSASVIDPGLSINILLINSSGAVSGKIIISSGAVLSSQTSPSILVAGSSSYVY IEGGYSAPRSSSSLMIYMVACGSPTLAACIYIPVQLVVMSPDT >Mature_682_residues ALILALIAGLTTLHAGVFSYRIMSNSVVVQPLNLVSITYPPQNLTCTGLSKIISGFYYQESFESIPLNWVVINATPTPKG FIGPGGYWSIVDGGYAGKAIRGYPLLWQVREHKTYTIYNPDTRFLPQTSNAIRIDSYQAGNTPIGNGYLLLIAPIELLNN TVVGTRLDVYFSWNRRTVGYIDLVNATIDRRDDAVIFSTYNDVPPYWRKYGTPSYIGIAEIYKARGGTTSYNFNSTLLQL QGYGPYMTYAITMTDYWNRQTLYFDVYWIALYDSTGSLIYNFTFPYGKYSVVMERSGTTGDYGYLNFGFPGFTAMYYNRD ISSYAVYTGVQVSTLLNIRGGVGWGSVILTDRVNNYYAFALNTSGYLNILRNAGTGWSVLKSALVPGYTNSTWYKLTVTY SRVGTTNYFSVYLYDVSGNLVTQLSASDDFFQPVFAGLGSYTSNLLYVDVLYDNFIIGQPAITLINAPGANYVGELWSLS DVLVSSGVSDASGIIRLPVDPATTMNGGVFKVYYPNNVACLATQYPSTEVIRAGDVYNVLWKPIYLDPSLLNVMFYIGYG ANTTYAPIFNVSIYSGYSAYAYLLLDTSASVIDPGLSINILLINSSGAVSGKIIISSGAVLSSQTSPSILVAGSSSYVYI EGGYSAPRSSSSLMIYMVACGSPTLAACIYIPVQLVVMSPDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74911; Mature: 74780
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILALIAGLTTLHAGVFSYRIMSNSVVVQPLNLVSITYPPQNLTCTGLSKIISGFYYQ CHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHH ESFESIPLNWVVINATPTPKGFIGPGGYWSIVDGGYAGKAIRGYPLLWQVREHKTYTIYN HHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEECCCEEEEEC PDTRFLPQTSNAIRIDSYQAGNTPIGNGYLLLIAPIELLNNTVVGTRLDVYFSWNRRTVG CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHCCEEEEEEEEEEEEECCCEEE YIDLVNATIDRRDDAVIFSTYNDVPPYWRKYGTPSYIGIAEIYKARGGTTSYNFNSTLLQ EEEEEECEECCCCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHCCCCCEEEECCCEEEE LQGYGPYMTYAITMTDYWNRQTLYFDVYWIALYDSTGSLIYNFTFPYGKYSVVMERSGTT EECCCCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC GDYGYLNFGFPGFTAMYYNRDISSYAVYTGVQVSTLLNIRGGVGWGSVILTDRVNNYYAF CCCCEEEECCCCEEEEEEECCCCCEEEEECEEEEEEEEECCCCCCCEEEEEECCCCEEEE ALNTSGYLNILRNAGTGWSVLKSALVPGYTNSTWYKLTVTYSRVGTTNYFSVYLYDVSGN EEECCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCC LVTQLSASDDFFQPVFAGLGSYTSNLLYVDVLYDNFIIGQPAITLINAPGANYVGELWSL EEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCEEEEECCCCCHHHHHHHH SDVLVSSGVSDASGIIRLPVDPATTMNGGVFKVYYPNNVACLATQYPSTEVIRAGDVYNV HHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECCCEEEE LWKPIYLDPSLLNVMFYIGYGANTTYAPIFNVSIYSGYSAYAYLLLDTSASVIDPGLSIN EEEEEEECHHHEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECCHHHCCCCCEEE ILLINSSGAVSGKIIISSGAVLSSQTSPSILVAGSSSYVYIEGGYSAPRSSSSLMIYMVA EEEEECCCCCEEEEEEECCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEE CGSPTLAACIYIPVQLVVMSPDT CCCCHHEEEEEEEEEEEEECCCC >Mature Secondary Structure ALILALIAGLTTLHAGVFSYRIMSNSVVVQPLNLVSITYPPQNLTCTGLSKIISGFYYQ HHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHH ESFESIPLNWVVINATPTPKGFIGPGGYWSIVDGGYAGKAIRGYPLLWQVREHKTYTIYN HHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEECCCEEEEEC PDTRFLPQTSNAIRIDSYQAGNTPIGNGYLLLIAPIELLNNTVVGTRLDVYFSWNRRTVG CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHCCEEEEEEEEEEEEECCCEEE YIDLVNATIDRRDDAVIFSTYNDVPPYWRKYGTPSYIGIAEIYKARGGTTSYNFNSTLLQ EEEEEECEECCCCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHCCCCCEEEECCCEEEE LQGYGPYMTYAITMTDYWNRQTLYFDVYWIALYDSTGSLIYNFTFPYGKYSVVMERSGTT EECCCCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC GDYGYLNFGFPGFTAMYYNRDISSYAVYTGVQVSTLLNIRGGVGWGSVILTDRVNNYYAF CCCCEEEECCCCEEEEEEECCCCCEEEEECEEEEEEEEECCCCCCCEEEEEECCCCEEEE ALNTSGYLNILRNAGTGWSVLKSALVPGYTNSTWYKLTVTYSRVGTTNYFSVYLYDVSGN EEECCCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCC LVTQLSASDDFFQPVFAGLGSYTSNLLYVDVLYDNFIIGQPAITLINAPGANYVGELWSL EEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCEEEEECCCCCHHHHHHHH SDVLVSSGVSDASGIIRLPVDPATTMNGGVFKVYYPNNVACLATQYPSTEVIRAGDVYNV HHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECCCEEEE LWKPIYLDPSLLNVMFYIGYGANTTYAPIFNVSIYSGYSAYAYLLLDTSASVIDPGLSIN EEEEEEECHHHEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECCHHHCCCCCEEE ILLINSSGAVSGKIIISSGAVLSSQTSPSILVAGSSSYVYIEGGYSAPRSSSSLMIYMVA EEEEECCCCCEEEEEEECCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEE CGSPTLAACIYIPVQLVVMSPDT CCCCHHEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA