Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883390

Identifier: 218883390

GI number: 218883390

Start: 68035

End: 69015

Strand: Direct

Name: 218883390

Synonym: DKAM_0076

Alternate gene names: NA

Gene position: 68035-69015 (Clockwise)

Preceding gene: 218883387

Following gene: 218883391

Centisome position: 4.98

GC content: 42.71

Gene sequence:

>981_bases
ATGGTTATCGGTATTTATAGTGTTATTTTAATTTTAAATTTAAGGTGTGAAATAGTAATGTTTGTCAGGGCATCAATAGG
TACGCTTGCAAAGCTCGGGTTAGCAGATATAAAGATTATTGATGAACCTAGAACAGCATACTTTCTTCAATACTCTGAAA
ACGGATGCCTCGGTAAATGCAGGTTCTGTAATCAGTCGAGAAGCTCGAGAGCTGGTAAAGACTGGCTTGGCAAGGTGACT
TGGCCACCCGTGGAGTTAGCTACTGTATTGGATTCATGGCGGGACGTCTTCGACCGCGTGTGCTTCCAGACAATTATTAA
GCAGGGATTTATCGAGGAAGCCCGTGTCTTTATACGTGAAATAACCCGAGTAAGCGATCTCCCTGTATCACTGGCTATAA
CACCTGTCTCCAAGAGTATTCTAAGGGAATTCAAGGAGCTAGGTGTAGATAAGCTTGGAGTAGGCCTTGACACCGTTACA
GAGGAATTGTTTACTAAATGGGGGAAACCCTACACGTGGAGGATCTACTGGAGGTTCATTGAGGAAGCCGTCGACGTATT
TGGAGAGGGGAATGTTTATGTACACATCATCGTAGGTCTGGGCGAGAGCCTCAGAGAAGCCCTTGAAACTATTATAAAAA
TATACTCGAAGGGGGCTCGGGTCGCGTTATTCAACTACTTTGACTCAAGTAACATGAAGAGTATTGATAAAAGATACTAT
AGGATAATCCAGTTAGCAGTAGAGCTCATTGAAAACGGGGAAGACCCATTAGAGTACATTGATCTAGACTCCATGAGGTT
TAAACAACAGCCAGGAATAGACGTCTATGAGGCATTATATACAAGGGGATGTCCCGGTTGTAATAGGCCGTTTTACACGG
ACCTACCCAGAGTAATATATAACTTCCCCTCACGTAAAATCCTTGAAAAACACAGAAATGAAATAATGAGAGAGTTGGAG
AGCATAGGTGTTAAGGCTTGA

Upstream 100 bases:

>100_bases
AATGCCTCATCCATTCCCATATTGAAAAATGCCGATCCGCCATCTAGATCGATTATTACTCTAAGCCTCATGGCAGCTAT
CCCGGGCATTACTTTGTAAC

Downstream 100 bases:

>100_bases
AGTATTTCATGCATTTAAGAAAATTTACAACCGTATCTATAACGGGCCCAGCCTGCATGTTAAACTGTAGGTTTTGTAGG
GGCCGCTACCTTAAAAACAT

Product: Biotin synthase-like protein

Products: biotin

Alternate protein names: Radical SAM Domain-Containing Protein; Biotin Synthase Related Protein; Biotin Synthase; Biotin Synthase-Related Protein; Biotin Synthase-Related; Radical SAM Superfamily Protein; Radical SAM Family Protein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT
WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT
EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY
RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE
SIGVKA

Sequences:

>Translated_326_residues
MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT
WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT
EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY
RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE
SIGVKA
>Mature_326_residues
MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT
WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT
EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY
RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE
SIGVKA

Specific function: Unknown

COG id: COG2516

COG function: function code R; Biotin synthase-related enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.8.1.6

Molecular weight: Translated: 37545; Mature: 37545

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKC
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCEEH
RFCNQSRSSRAGKDWLGKVTWPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIRE
HHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVTEELFTKWGKPYTWRIYWRFI
HHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHH
EEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIY
HHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
NFPSRKILEKHRNEIMRELESIGVKA
HCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKC
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCEEH
RFCNQSRSSRAGKDWLGKVTWPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIRE
HHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVTEELFTKWGKPYTWRIYWRFI
HHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHH
EEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY
HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH
RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIY
HHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
NFPSRKILEKHRNEIMRELESIGVKA
HCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dethiobiotin; sulfur

Specific reaction: dethiobiotin + sulfur = biotin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA