| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883390
Identifier: 218883390
GI number: 218883390
Start: 68035
End: 69015
Strand: Direct
Name: 218883390
Synonym: DKAM_0076
Alternate gene names: NA
Gene position: 68035-69015 (Clockwise)
Preceding gene: 218883387
Following gene: 218883391
Centisome position: 4.98
GC content: 42.71
Gene sequence:
>981_bases ATGGTTATCGGTATTTATAGTGTTATTTTAATTTTAAATTTAAGGTGTGAAATAGTAATGTTTGTCAGGGCATCAATAGG TACGCTTGCAAAGCTCGGGTTAGCAGATATAAAGATTATTGATGAACCTAGAACAGCATACTTTCTTCAATACTCTGAAA ACGGATGCCTCGGTAAATGCAGGTTCTGTAATCAGTCGAGAAGCTCGAGAGCTGGTAAAGACTGGCTTGGCAAGGTGACT TGGCCACCCGTGGAGTTAGCTACTGTATTGGATTCATGGCGGGACGTCTTCGACCGCGTGTGCTTCCAGACAATTATTAA GCAGGGATTTATCGAGGAAGCCCGTGTCTTTATACGTGAAATAACCCGAGTAAGCGATCTCCCTGTATCACTGGCTATAA CACCTGTCTCCAAGAGTATTCTAAGGGAATTCAAGGAGCTAGGTGTAGATAAGCTTGGAGTAGGCCTTGACACCGTTACA GAGGAATTGTTTACTAAATGGGGGAAACCCTACACGTGGAGGATCTACTGGAGGTTCATTGAGGAAGCCGTCGACGTATT TGGAGAGGGGAATGTTTATGTACACATCATCGTAGGTCTGGGCGAGAGCCTCAGAGAAGCCCTTGAAACTATTATAAAAA TATACTCGAAGGGGGCTCGGGTCGCGTTATTCAACTACTTTGACTCAAGTAACATGAAGAGTATTGATAAAAGATACTAT AGGATAATCCAGTTAGCAGTAGAGCTCATTGAAAACGGGGAAGACCCATTAGAGTACATTGATCTAGACTCCATGAGGTT TAAACAACAGCCAGGAATAGACGTCTATGAGGCATTATATACAAGGGGATGTCCCGGTTGTAATAGGCCGTTTTACACGG ACCTACCCAGAGTAATATATAACTTCCCCTCACGTAAAATCCTTGAAAAACACAGAAATGAAATAATGAGAGAGTTGGAG AGCATAGGTGTTAAGGCTTGA
Upstream 100 bases:
>100_bases AATGCCTCATCCATTCCCATATTGAAAAATGCCGATCCGCCATCTAGATCGATTATTACTCTAAGCCTCATGGCAGCTAT CCCGGGCATTACTTTGTAAC
Downstream 100 bases:
>100_bases AGTATTTCATGCATTTAAGAAAATTTACAACCGTATCTATAACGGGCCCAGCCTGCATGTTAAACTGTAGGTTTTGTAGG GGCCGCTACCTTAAAAACAT
Product: Biotin synthase-like protein
Products: biotin
Alternate protein names: Radical SAM Domain-Containing Protein; Biotin Synthase Related Protein; Biotin Synthase; Biotin Synthase-Related Protein; Biotin Synthase-Related; Radical SAM Superfamily Protein; Radical SAM Family Protein
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE SIGVKA
Sequences:
>Translated_326_residues MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE SIGVKA >Mature_326_residues MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKCRFCNQSRSSRAGKDWLGKVT WPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIREITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVT EELFTKWGKPYTWRIYWRFIEEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIYNFPSRKILEKHRNEIMRELE SIGVKA
Specific function: Unknown
COG id: COG2516
COG function: function code R; Biotin synthase-related enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.1.6
Molecular weight: Translated: 37545; Mature: 37545
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKC CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCEEH RFCNQSRSSRAGKDWLGKVTWPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIRE HHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVTEELFTKWGKPYTWRIYWRFI HHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHH EEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIY HHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH NFPSRKILEKHRNEIMRELESIGVKA HCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIGIYSVILILNLRCEIVMFVRASIGTLAKLGLADIKIIDEPRTAYFLQYSENGCLGKC CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEECCCCCCEEH RFCNQSRSSRAGKDWLGKVTWPPVELATVLDSWRDVFDRVCFQTIIKQGFIEEARVFIRE HHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ITRVSDLPVSLAITPVSKSILREFKELGVDKLGVGLDTVTEELFTKWGKPYTWRIYWRFI HHHHHCCCEEEEECHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHH EEAVDVFGEGNVYVHIIVGLGESLREALETIIKIYSKGARVALFNYFDSSNMKSIDKRYY HHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHH RIIQLAVELIENGEDPLEYIDLDSMRFKQQPGIDVYEALYTRGCPGCNRPFYTDLPRVIY HHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH NFPSRKILEKHRNEIMRELESIGVKA HCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dethiobiotin; sulfur
Specific reaction: dethiobiotin + sulfur = biotin
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA