| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883385
Identifier: 218883385
GI number: 218883385
Start: 64904
End: 65140
Strand: Reverse
Name: 218883385
Synonym: DKAM_0071
Alternate gene names: NA
Gene position: 65140-64904 (Counterclockwise)
Preceding gene: 218883388
Following gene: 218883384
Centisome position: 4.77
GC content: 48.52
Gene sequence:
>237_bases ATGACTACAACACTGGACAACGTTAAGCCAGGGTCTAGGGCCAGGATCATTAATATATTACATCGGGGAGGCTGGGTTTA CAGAATGTACCAGCTCGGGGTATTTCCAGGGGTAGAAGTAGAAGTAGTATATAATGACGGAAGAGGCCCCATAGTGCTTA GGGTAGGCGACTCAGAGATAGCCGTGGGGAGAGGGATAGCTAGGAGAATAATTGTGGAGCATAGTGGGGGATCATGA
Upstream 100 bases:
>100_bases CATATAATTAGCTATGTGTTCTGATCACCGAAAAATTTTTATTCACCTAATACAATCATGTTTATAATAGAGTGTTAGGA TGACCTAACAGGTATCGAAC
Downstream 100 bases:
>100_bases AGTGAAGACGGTCAAGGTAGTGTTTATAGGGCAACCCAACGTCGGGAAATCATCCCTCTTCAACCTAGTGACTAAATCCC ATGTCGAGGTAGGTAACTGG
Product: FeoA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTTTLDNVKPGSRARIINILHRGGWVYRMYQLGVFPGVEVEVVYNDGRGPIVLRVGDSEIAVGRGIARRIIVEHSGGS
Sequences:
>Translated_78_residues MTTTLDNVKPGSRARIINILHRGGWVYRMYQLGVFPGVEVEVVYNDGRGPIVLRVGDSEIAVGRGIARRIIVEHSGGS >Mature_77_residues TTTLDNVKPGSRARIINILHRGGWVYRMYQLGVFPGVEVEVVYNDGRGPIVLRVGDSEIAVGRGIARRIIVEHSGGS
Specific function: Unknown
COG id: COG1918
COG function: function code P; Fe2+ transport system protein A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8533; Mature: 8402
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLDNVKPGSRARIINILHRGGWVYRMYQLGVFPGVEVEVVYNDGRGPIVLRVGDSEI CCCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCE AVGRGIARRIIVEHSGGS EECCCCEEEEEEEECCCC >Mature Secondary Structure TTTLDNVKPGSRARIINILHRGGWVYRMYQLGVFPGVEVEVVYNDGRGPIVLRVGDSEI CCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCE AVGRGIARRIIVEHSGGS EECCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA