| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883368
Identifier: 218883368
GI number: 218883368
Start: 50425
End: 50574
Strand: Reverse
Name: 218883368
Synonym: DKAM_0054
Alternate gene names: NA
Gene position: 50574-50425 (Counterclockwise)
Preceding gene: 218883370
Following gene: 218883366
Centisome position: 3.7
GC content: 38.67
Gene sequence:
>150_bases ATGGTTAAATATAAGTGTGGTAGATGCGGTTATGTATTCGACGAGGAGGAGATGAAGAGGATCTTCGGTAAACAAGTTAA ATGCCCTAACTGCACGTATGAGATAGTATACAAGGTTGCAAGACCATACAGAATCATTAAAGCTACTTAG
Upstream 100 bases:
>100_bases CATTGCCTACTCCATCACCAACTCAAAGATTCCAATTAGAAAATATGTAGAGGGAGGTTTTAAAGTCTTTGAACATTATA CTGGTGTATGGTGGGCTAGC
Downstream 100 bases:
>100_bases CCTCGGTATGCTGTTTCTGCTTTCATATAGGTTTGCTATTAAATTCTTTTATTGAAGAATGTAATCGCATGCATGAATCT ATTCCTTAAATCCCTTAATT
Product: DNA-directed RNA polymerase subunit P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 49
Protein sequence:
>49_residues MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT
Sequences:
>Translated_49_residues MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT >Mature_49_residues MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5857; Mature: 5857
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECC >Mature Secondary Structure MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA