Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883368

Identifier: 218883368

GI number: 218883368

Start: 50425

End: 50574

Strand: Reverse

Name: 218883368

Synonym: DKAM_0054

Alternate gene names: NA

Gene position: 50574-50425 (Counterclockwise)

Preceding gene: 218883370

Following gene: 218883366

Centisome position: 3.7

GC content: 38.67

Gene sequence:

>150_bases
ATGGTTAAATATAAGTGTGGTAGATGCGGTTATGTATTCGACGAGGAGGAGATGAAGAGGATCTTCGGTAAACAAGTTAA
ATGCCCTAACTGCACGTATGAGATAGTATACAAGGTTGCAAGACCATACAGAATCATTAAAGCTACTTAG

Upstream 100 bases:

>100_bases
CATTGCCTACTCCATCACCAACTCAAAGATTCCAATTAGAAAATATGTAGAGGGAGGTTTTAAAGTCTTTGAACATTATA
CTGGTGTATGGTGGGCTAGC

Downstream 100 bases:

>100_bases
CCTCGGTATGCTGTTTCTGCTTTCATATAGGTTTGCTATTAAATTCTTTTATTGAAGAATGTAATCGCATGCATGAATCT
ATTCCTTAAATCCCTTAATT

Product: DNA-directed RNA polymerase subunit P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT

Sequences:

>Translated_49_residues
MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT
>Mature_49_residues
MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5857; Mature: 5857

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT
CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECC
>Mature Secondary Structure
MVKYKCGRCGYVFDEEEMKRIFGKQVKCPNCTYEIVYKVARPYRIIKAT
CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA