| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883360
Identifier: 218883360
GI number: 218883360
Start: 43051
End: 43494
Strand: Reverse
Name: 218883360
Synonym: DKAM_0046
Alternate gene names: NA
Gene position: 43494-43051 (Counterclockwise)
Preceding gene: 218883361
Following gene: 218883358
Centisome position: 3.19
GC content: 45.05
Gene sequence:
>444_bases TTGAATAACACTAGTAGTGAGCGATGGAGGAATGAAGACCGACGCCACTACGAGGGTAGAGGAGCTAGGTATGAGAAAAC AGGACATCATGGTAGTTATGCATCAACCCGTTTCCAACACCTCGAGGAGAAGAGGCTGGAGCCGCAGCCTATAGGTGATA AATGTAATCCTCTATGCCCATTTTTCACCTGCAACAAGAACGCCTTAATGATAACCTCCAAGCCTGTAAGGGGAAAAATG ATCCGCGTTGCACAATGTAGATTAATAGGCGGAGATTGTATCAACGGTGAGTGCCAATATGCATCGTGCAGGTTGAATTC ACTACTACCAGATGGTAGATGTGCCAAGGCATTGGAGAGAAAGATTAAGCAGAGCAGCGATGAAGAAATGTTCAAGCAAA TGAAGCAGTTCGAAGACTATGATGTAAGCGACTTCATAAGGTGA
Upstream 100 bases:
>100_bases CATGAGTCTAAGTCTGTGTGAGCCTTAAAAACATTTTTCAACATTAAATGTTAACGAGAGATAGTGTAGCTGATAATAGT AAATCATGGGGTGTGCCTAG
Downstream 100 bases:
>100_bases TAAGACTGGTTAAAAAATGCCCTCCTTGAACGCTAAATAATCTAATGTCAACGAGTGAACGGATATCATAGAGGTTGAAA CTGCCTTGGCTTTTTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR
Sequences:
>Translated_147_residues MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR >Mature_147_residues MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17101; Mature: 17101
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCP CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC FFTCNKNALMITSKPVRGKMIRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALER EEECCCCEEEEECCCCCCHHEEHHHEEEECCCCCCCCCCCCEEHHHHCCCCCHHHHHHHH KIKQSSDEEMFKQMKQFEDYDVSDFIR HHHCCCHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCP CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC FFTCNKNALMITSKPVRGKMIRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALER EEECCCCEEEEECCCCCCHHEEHHHEEEECCCCCCCCCCCCEEHHHHCCCCCHHHHHHHH KIKQSSDEEMFKQMKQFEDYDVSDFIR HHHCCCHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA