Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883360

Identifier: 218883360

GI number: 218883360

Start: 43051

End: 43494

Strand: Reverse

Name: 218883360

Synonym: DKAM_0046

Alternate gene names: NA

Gene position: 43494-43051 (Counterclockwise)

Preceding gene: 218883361

Following gene: 218883358

Centisome position: 3.19

GC content: 45.05

Gene sequence:

>444_bases
TTGAATAACACTAGTAGTGAGCGATGGAGGAATGAAGACCGACGCCACTACGAGGGTAGAGGAGCTAGGTATGAGAAAAC
AGGACATCATGGTAGTTATGCATCAACCCGTTTCCAACACCTCGAGGAGAAGAGGCTGGAGCCGCAGCCTATAGGTGATA
AATGTAATCCTCTATGCCCATTTTTCACCTGCAACAAGAACGCCTTAATGATAACCTCCAAGCCTGTAAGGGGAAAAATG
ATCCGCGTTGCACAATGTAGATTAATAGGCGGAGATTGTATCAACGGTGAGTGCCAATATGCATCGTGCAGGTTGAATTC
ACTACTACCAGATGGTAGATGTGCCAAGGCATTGGAGAGAAAGATTAAGCAGAGCAGCGATGAAGAAATGTTCAAGCAAA
TGAAGCAGTTCGAAGACTATGATGTAAGCGACTTCATAAGGTGA

Upstream 100 bases:

>100_bases
CATGAGTCTAAGTCTGTGTGAGCCTTAAAAACATTTTTCAACATTAAATGTTAACGAGAGATAGTGTAGCTGATAATAGT
AAATCATGGGGTGTGCCTAG

Downstream 100 bases:

>100_bases
TAAGACTGGTTAAAAAATGCCCTCCTTGAACGCTAAATAATCTAATGTCAACGAGTGAACGGATATCATAGAGGTTGAAA
CTGCCTTGGCTTTTTTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM
IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR

Sequences:

>Translated_147_residues
MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM
IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR
>Mature_147_residues
MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCPFFTCNKNALMITSKPVRGKM
IRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALERKIKQSSDEEMFKQMKQFEDYDVSDFIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17101; Mature: 17101

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCP
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
FFTCNKNALMITSKPVRGKMIRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALER
EEECCCCEEEEECCCCCCHHEEHHHEEEECCCCCCCCCCCCEEHHHHCCCCCHHHHHHHH
KIKQSSDEEMFKQMKQFEDYDVSDFIR
HHHCCCHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MNNTSSERWRNEDRRHYEGRGARYEKTGHHGSYASTRFQHLEEKRLEPQPIGDKCNPLCP
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
FFTCNKNALMITSKPVRGKMIRVAQCRLIGGDCINGECQYASCRLNSLLPDGRCAKALER
EEECCCCEEEEECCCCCCHHEEHHHEEEECCCCCCCCCCCCEEHHHHCCCCCHHHHHHHH
KIKQSSDEEMFKQMKQFEDYDVSDFIR
HHHCCCHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA