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The map label for this gene is ypfI [C]

Identifier: 218883355

GI number: 218883355

Start: 35696

End: 38140

Strand: Reverse

Name: ypfI [C]

Synonym: DKAM_0041

Alternate gene names: 218883355

Gene position: 38140-35696 (Counterclockwise)

Preceding gene: 218883356

Following gene: 218883353

Centisome position: 2.79

GC content: 43.8

Gene sequence:

>2445_bases
ATGAATAGTTCTATCCCGGCTTCATTCTTAAAGTTTTTAACGCAGTGTGGAAGGACTTCAGAGAAGCTGGCGAGATACCG
TATAAGAGGCATGGTTGTAATCTCTGGCTCGAACCCCGTTAAAATGGCATCTCTAACGTATAGGCTAATATATTACTATG
TTAAGAAATGGCGTAGAGCGATTAAGGATAAGAAAGAGTTCACAGGGCTATATATCTACCACGACGAGTTCGACGATGCA
GTCTCAATGCGTAGTGAGTTTGAAAAACAGATAGGAAAGTTAGGGGACATAGATTTCCAATTCACGGTCTACGAGAAAAG
CGATAAATACCTGGGTATAACGGTCTCAATCCTCGTTATGGATTTAACACGTGATTTAAAGCCTAACGACCTGGGGAGGT
TAATCGGTATAGTTGAGGGAGGCGGCCTAATTGTATTACTGACGCCACCGTGGGATAAATGGGACGAATTCAAGACGATA
TTCAAGATGAACTTAACGGTTCCCCAATACCCTGAGCCACGTCACGTGTTTATTAAATGGGTTAAAAAACACCTATTGGA
ATTCGATGGAATAGGCATCTATGATGCTGACAATAATAGAATTATAAAGAGGCTTGAACTAAGAAACGAGTATATGCCTT
ACGAGAGAAAAATAGACATACCGAAAAACACGTTGTTCCCGAGCGGGGTTTACGAGCACGCCTTAACCATGGATCAAGTC
AACGTGTTGAAAATCATCGAGGAATTCTATGAGAAGCCACCTCCCGGTAAGAAGAAAGTACTCGTACTTACAGCGGATAG
GGGAAGGGGGAAGAGTTGTGCAGTGGGCATAGGCGCTGTTGGATTAATACACTTACTTAGAAAAGTAAAGCCTAAGCCAC
GAGTCCTTGTCACAGCACCGGAGCCAAGCAATATCCAATCCTTAATGATGCTCGCCATGAAGGTCCTTGATAAACTAGGG
TATAAGTATGATGTAATCAGGAGAGATGGAAATGTAATAGAGTTGAGAAGCGATAGGTTCAGCATAGAATACTGGGAGCC
ATTAAACATCCCGAAAATCAATGGTGATGTAGTCATAGTGGATGAAGCGGCCGGTATCCACGTTCCATTATTATACAAGA
TCCTGGAGTCGCATAAACGGATAATCTTTTCGAGCACTATACATGGCTACGAGGGTGCCGGTAGAGGGTTCTCAGTGAGG
TTCCTTAAGAGGATAAAGAATAGTAAAGATATTATCTTATACGAGTATGAGATGACTGAGCCAATACGTTACAATTACAA
TGACCCCATAGAAAACTGGCAGTTTAAAACACTTCTCCTTGATGCTGAGCCAGCCGAGTTGAGCGAGGAGGACTTGAAGG
ATATAGAGTCAGGCAACCTCGTGTATGTAGAATATGCTCCAGAGGAATTATTTAATAATGAGAATGAGCTGAGACAGCTA
TTTGGAATATACGTCCTGGCACACTACCGTAACGAGCCAGATGATCTCGGAATGATAGCCGATGCCCCCCATCACCTTGT
AAGGGCTGCAAAGACGAGGAATGGTAAAATAGTTTGCGCTGTTCAGATAGCCTACGAGGGACCAATAGATGAGGCAACAG
CCACAGAACTACTTAAAGGATCGAAGATACCCGGAAACATTATTCCGGATAGGTTTCTTAAGCACCTGAGATATGTGGAC
TTCGCTAAGACCAAGGGGTGGCGTATAGTAAGAATAGCAACGCATCCAGCTGTACAGGGTAAGGGGATTGGAAGCTGGAT
ACTTAATAGAATAAGAGAGGAGGCCGTTCGACTGGGATTGGACTGGATTGGCTCTGGATTTGGTGTAAACGAGCAATTAT
TGAGGTTCTGGCTTAGAAATGGGTTTATCCCTGTACACATCAGCCCGGATAGAAATCCTGTAAGCGGGGAGTATACAATA
CTGGTGGTACAGCCGATAAGTGAGGTAGCGAGGAGACTGGTTGAGAAGGCTGCAGGCGAGTTTAAATCCAAGATACTTAA
TAGTATACCGGTTAACTACAGGGAGATGGAGCCTGAGATAGCCCTACTTATTCTTGATAGCGAGCCATACGTATACCGTG
ATAAACCAATACACATGTTCACTCCTGTGGCAATAGATCGCCTATGGACGTACTGCCAGGGACCTATGACTTTCGAGGCT
GCTGCAGATATAATGTTCAAGATTGCTAGAATACATTGGTTGCTCCACCCAGATGTAAGGCCTAAGCTGACCCGTCTCCA
GGAAATAGTATTGCTCACTAAGTCTCTTCAAGCACTCACATGGGACGAAGTTCATGAGATAACCCGTGTACCGGTTAAAG
AGCTTCAGAAGGAGGGGCATGAGATAGCCTGTATATACTTTAACTACTTGACTAGCTTAGAGCCAGATAAATACGTGCCC
GGTGTACGGGATTATATGTATGAATTCCATGAGTCCAATATTTAA

Upstream 100 bases:

>100_bases
AGCGGCTCCTTTAGAAGGGTTTCACTACCCTACGGCTAGTTTTTACTCGTACTCCACGGCTTTCATGTAGTGAAGCATCC
GGTATATTTGGTGATTAGAT

Downstream 100 bases:

>100_bases
CCCTCATACTCTAATTTATCAAAGCCGCTCTCAATAATTCTCGCTACTACATCTGGTGGGAGTACTAAATCCCATCTAGA
GGCCTTCACGGGTCCAGCTA

Product: putative P-loop ATPase fused to an acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 814; Mature: 814

Protein sequence:

>814_residues
MNSSIPASFLKFLTQCGRTSEKLARYRIRGMVVISGSNPVKMASLTYRLIYYYVKKWRRAIKDKKEFTGLYIYHDEFDDA
VSMRSEFEKQIGKLGDIDFQFTVYEKSDKYLGITVSILVMDLTRDLKPNDLGRLIGIVEGGGLIVLLTPPWDKWDEFKTI
FKMNLTVPQYPEPRHVFIKWVKKHLLEFDGIGIYDADNNRIIKRLELRNEYMPYERKIDIPKNTLFPSGVYEHALTMDQV
NVLKIIEEFYEKPPPGKKKVLVLTADRGRGKSCAVGIGAVGLIHLLRKVKPKPRVLVTAPEPSNIQSLMMLAMKVLDKLG
YKYDVIRRDGNVIELRSDRFSIEYWEPLNIPKINGDVVIVDEAAGIHVPLLYKILESHKRIIFSSTIHGYEGAGRGFSVR
FLKRIKNSKDIILYEYEMTEPIRYNYNDPIENWQFKTLLLDAEPAELSEEDLKDIESGNLVYVEYAPEELFNNENELRQL
FGIYVLAHYRNEPDDLGMIADAPHHLVRAAKTRNGKIVCAVQIAYEGPIDEATATELLKGSKIPGNIIPDRFLKHLRYVD
FAKTKGWRIVRIATHPAVQGKGIGSWILNRIREEAVRLGLDWIGSGFGVNEQLLRFWLRNGFIPVHISPDRNPVSGEYTI
LVVQPISEVARRLVEKAAGEFKSKILNSIPVNYREMEPEIALLILDSEPYVYRDKPIHMFTPVAIDRLWTYCQGPMTFEA
AADIMFKIARIHWLLHPDVRPKLTRLQEIVLLTKSLQALTWDEVHEITRVPVKELQKEGHEIACIYFNYLTSLEPDKYVP
GVRDYMYEFHESNI

Sequences:

>Translated_814_residues
MNSSIPASFLKFLTQCGRTSEKLARYRIRGMVVISGSNPVKMASLTYRLIYYYVKKWRRAIKDKKEFTGLYIYHDEFDDA
VSMRSEFEKQIGKLGDIDFQFTVYEKSDKYLGITVSILVMDLTRDLKPNDLGRLIGIVEGGGLIVLLTPPWDKWDEFKTI
FKMNLTVPQYPEPRHVFIKWVKKHLLEFDGIGIYDADNNRIIKRLELRNEYMPYERKIDIPKNTLFPSGVYEHALTMDQV
NVLKIIEEFYEKPPPGKKKVLVLTADRGRGKSCAVGIGAVGLIHLLRKVKPKPRVLVTAPEPSNIQSLMMLAMKVLDKLG
YKYDVIRRDGNVIELRSDRFSIEYWEPLNIPKINGDVVIVDEAAGIHVPLLYKILESHKRIIFSSTIHGYEGAGRGFSVR
FLKRIKNSKDIILYEYEMTEPIRYNYNDPIENWQFKTLLLDAEPAELSEEDLKDIESGNLVYVEYAPEELFNNENELRQL
FGIYVLAHYRNEPDDLGMIADAPHHLVRAAKTRNGKIVCAVQIAYEGPIDEATATELLKGSKIPGNIIPDRFLKHLRYVD
FAKTKGWRIVRIATHPAVQGKGIGSWILNRIREEAVRLGLDWIGSGFGVNEQLLRFWLRNGFIPVHISPDRNPVSGEYTI
LVVQPISEVARRLVEKAAGEFKSKILNSIPVNYREMEPEIALLILDSEPYVYRDKPIHMFTPVAIDRLWTYCQGPMTFEA
AADIMFKIARIHWLLHPDVRPKLTRLQEIVLLTKSLQALTWDEVHEITRVPVKELQKEGHEIACIYFNYLTSLEPDKYVP
GVRDYMYEFHESNI
>Mature_814_residues
MNSSIPASFLKFLTQCGRTSEKLARYRIRGMVVISGSNPVKMASLTYRLIYYYVKKWRRAIKDKKEFTGLYIYHDEFDDA
VSMRSEFEKQIGKLGDIDFQFTVYEKSDKYLGITVSILVMDLTRDLKPNDLGRLIGIVEGGGLIVLLTPPWDKWDEFKTI
FKMNLTVPQYPEPRHVFIKWVKKHLLEFDGIGIYDADNNRIIKRLELRNEYMPYERKIDIPKNTLFPSGVYEHALTMDQV
NVLKIIEEFYEKPPPGKKKVLVLTADRGRGKSCAVGIGAVGLIHLLRKVKPKPRVLVTAPEPSNIQSLMMLAMKVLDKLG
YKYDVIRRDGNVIELRSDRFSIEYWEPLNIPKINGDVVIVDEAAGIHVPLLYKILESHKRIIFSSTIHGYEGAGRGFSVR
FLKRIKNSKDIILYEYEMTEPIRYNYNDPIENWQFKTLLLDAEPAELSEEDLKDIESGNLVYVEYAPEELFNNENELRQL
FGIYVLAHYRNEPDDLGMIADAPHHLVRAAKTRNGKIVCAVQIAYEGPIDEATATELLKGSKIPGNIIPDRFLKHLRYVD
FAKTKGWRIVRIATHPAVQGKGIGSWILNRIREEAVRLGLDWIGSGFGVNEQLLRFWLRNGFIPVHISPDRNPVSGEYTI
LVVQPISEVARRLVEKAAGEFKSKILNSIPVNYREMEPEIALLILDSEPYVYRDKPIHMFTPVAIDRLWTYCQGPMTFEA
AADIMFKIARIHWLLHPDVRPKLTRLQEIVLLTKSLQALTWDEVHEITRVPVKELQKEGHEIACIYFNYLTSLEPDKYVP
GVRDYMYEFHESNI

Specific function: Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP) [H]

COG id: COG1444

COG function: function code R; Predicted P-loop ATPase fused to an acetyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI221316723, Length=813, Percent_Identity=25.5842558425584, Blast_Score=207, Evalue=5e-53,
Organism=Homo sapiens, GI221316741, Length=813, Percent_Identity=25.5842558425584, Blast_Score=206, Evalue=5e-53,
Organism=Escherichia coli, GI1788818, Length=549, Percent_Identity=26.9581056466302, Blast_Score=177, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17507621, Length=562, Percent_Identity=26.3345195729537, Blast_Score=163, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6324197, Length=577, Percent_Identity=28.2495667244367, Blast_Score=180, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24640662, Length=795, Percent_Identity=27.1698113207547, Blast_Score=217, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR013562
- InterPro:   IPR007807 [H]

Pfam domain/function: PF08351 DUF1726; PF05127 DUF699 [H]

EC number: NA

Molecular weight: Translated: 93953; Mature: 93953

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSIPASFLKFLTQCGRTSEKLARYRIRGMVVISGSNPVKMASLTYRLIYYYVKKWRRA
CCCCCHHHHHHHHHHHCCCHHHHHHHEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHH
IKDKKEFTGLYIYHDEFDDAVSMRSEFEKQIGKLGDIDFQFTVYEKSDKYLGITVSILVM
HCCHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEHEEEEE
DLTRDLKPNDLGRLIGIVEGGGLIVLLTPPWDKWDEFKTIFKMNLTVPQYPEPRHVFIKW
HHHCCCCCCCHHHEEEEEECCCEEEEECCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHH
VKKHLLEFDGIGIYDADNNRIIKRLELRNEYMPYERKIDIPKNTLFPSGVYEHALTMDQV
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
NVLKIIEEFYEKPPPGKKKVLVLTADRGRGKSCAVGIGAVGLIHLLRKVKPKPRVLVTAP
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEECC
EPSNIQSLMMLAMKVLDKLGYKYDVIRRDGNVIELRSDRFSIEYWEPLNIPKINGDVVIV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCEEEE
DEAAGIHVPLLYKILESHKRIIFSSTIHGYEGAGRGFSVRFLKRIKNSKDIILYEYEMTE
ECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCC
PIRYNYNDPIENWQFKTLLLDAEPAELSEEDLKDIESGNLVYVEYAPEELFNNENELRQL
CEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHH
FGIYVLAHYRNEPDDLGMIADAPHHLVRAAKTRNGKIVCAVQIAYEGPIDEATATELLKG
HHHHHHEECCCCCHHCCEECCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHCC
SKIPGNIIPDRFLKHLRYVDFAKTKGWRIVRIATHPAVQGKGIGSWILNRIREEAVRLGL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCH
DWIGSGFGVNEQLLRFWLRNGFIPVHISPDRNPVSGEYTILVVQPISEVARRLVEKAAGE
HHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
FKSKILNSIPVNYREMEPEIALLILDSEPYVYRDKPIHMFTPVAIDRLWTYCQGPMTFEA
HHHHHHHHCCCCCEECCCCEEEEEECCCCCEEECCCCEEECHHHHHHHHHHHCCCEEHHH
AADIMFKIARIHWLLHPDVRPKLTRLQEIVLLTKSLQALTWDEVHEITRVPVKELQKEGH
HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCC
EIACIYFNYLTSLEPDKYVPGVRDYMYEFHESNI
EEEEEEEEHHCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNSSIPASFLKFLTQCGRTSEKLARYRIRGMVVISGSNPVKMASLTYRLIYYYVKKWRRA
CCCCCHHHHHHHHHHHCCCHHHHHHHEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHH
IKDKKEFTGLYIYHDEFDDAVSMRSEFEKQIGKLGDIDFQFTVYEKSDKYLGITVSILVM
HCCHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEHEEEEE
DLTRDLKPNDLGRLIGIVEGGGLIVLLTPPWDKWDEFKTIFKMNLTVPQYPEPRHVFIKW
HHHCCCCCCCHHHEEEEEECCCEEEEECCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHH
VKKHLLEFDGIGIYDADNNRIIKRLELRNEYMPYERKIDIPKNTLFPSGVYEHALTMDQV
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
NVLKIIEEFYEKPPPGKKKVLVLTADRGRGKSCAVGIGAVGLIHLLRKVKPKPRVLVTAP
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEECC
EPSNIQSLMMLAMKVLDKLGYKYDVIRRDGNVIELRSDRFSIEYWEPLNIPKINGDVVIV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCCEEEE
DEAAGIHVPLLYKILESHKRIIFSSTIHGYEGAGRGFSVRFLKRIKNSKDIILYEYEMTE
ECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCC
PIRYNYNDPIENWQFKTLLLDAEPAELSEEDLKDIESGNLVYVEYAPEELFNNENELRQL
CEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHH
FGIYVLAHYRNEPDDLGMIADAPHHLVRAAKTRNGKIVCAVQIAYEGPIDEATATELLKG
HHHHHHEECCCCCHHCCEECCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHCC
SKIPGNIIPDRFLKHLRYVDFAKTKGWRIVRIATHPAVQGKGIGSWILNRIREEAVRLGL
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCH
DWIGSGFGVNEQLLRFWLRNGFIPVHISPDRNPVSGEYTILVVQPISEVARRLVEKAAGE
HHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
FKSKILNSIPVNYREMEPEIALLILDSEPYVYRDKPIHMFTPVAIDRLWTYCQGPMTFEA
HHHHHHHHCCCCCEECCCCEEEEEECCCCCEEECCCCEEECHHHHHHHHHHHCCCEEHHH
AADIMFKIARIHWLLHPDVRPKLTRLQEIVLLTKSLQALTWDEVHEITRVPVKELQKEGH
HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCC
EIACIYFNYLTSLEPDKYVPGVRDYMYEFHESNI
EEEEEEEEHHCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA