Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883337

Identifier: 218883337

GI number: 218883337

Start: 20514

End: 22481

Strand: Direct

Name: 218883337

Synonym: DKAM_0023

Alternate gene names: NA

Gene position: 20514-22481 (Clockwise)

Preceding gene: 218883336

Following gene: 218883340

Centisome position: 1.5

GC content: 43.5

Gene sequence:

>1968_bases
GTGGGATCGGGTATAAATAGATGTTTTAAGCTAAGTAACTACCTAGGTGATACCATAGTCGTCACAGTAATCGGCGTGGA
TATACAACCTGGTTCATCACCGAATAGCAGAAGGCAACCCCTCTATTCAGCCGTGGTGCTAAGGAATGGAGAGATCATTG
CATCCTTTGAGGACGTCGAGTTATATAGATTGCTTAGACTAGTATTGGAGTATCATGTTGATATTATAGCTGTTGACAAC
ATATATGAATTAGCCCCCTCTGAGAATGAGTTGAGAAGGATATTTGAGTTGCTCCCTGGAAACGTTAAAGTGGTCCAGGT
GACAGGGCCGCCAAATGATGCAAGAGATGTAAATAGTGTGGCAAGGGAGCTAGGGATAGATACGGTGATTGAGACACCGT
TGAAGACAGCCTATATAAATGCATTGGCAGCCTATAGGGGTATAGGTTATGAGGTCAGGTTATTTGCTGAGAAAACTAGG
ATAGTTGTTACGAAGGGGAGAAGTGTAACACAGGGTGGTATGAGCCGGGATAGATTCCTGAGGTGTATAAGGGCCAGTAT
CGCTCAAGCAACAAAGGAGATAAAGCGTATCCTGGATGAGAACAAGCTCGACTATGATATGGTGATAAAGAGGAGCAAGG
GAGGCCTTGAGAAAAGCGTGTTCATAGTTTATGCTCCAAGGGAAAGCCTATACGGTTTAATAAAGCCTTTAAAGTACAAG
AATGTTAAGATAATTATTAAGCCGTATGCGAGCAGGAAGTCGATAGAGCCAGTAAGCGATCAAGCCAGGAAACCTGTGAT
AGTTGGCGTGGATCCAGGCATGAGTATAGGTGTCTCAGTTCTTACGCTAGATGGGGAACCAGTACTCATAACCAGTATGA
AGAGCCCTGATAGGGATGAAATAGTCAACTTGATAAGCAGGATTGGTAAACCTGTAGTGGTTGCGACGGATGTTTCAAAA
CCGCCTGAAACAGTTGTGAAGCTTGCATCAATGCTTAACGCGGTGCTTTACGTTCCCGAGCAAGATATAACTATCGATGA
GAAAAACAGGATAGCTAGGGAATACTCGGAGAAATACGTGGTCAACATACCTGACTCACATACTAGGGATGCCTTGGCAG
CTGCTGTAAAGGCGTATAATAATTATAAAGCCACTATTGAAGAAGTGAAATCGAAGCTCGCTAACATGAAAAAAGTAGAT
AGGTACCAGCTTATAGCCGAGATAATCAGGGGTAAACCCTTCTCAGAGGTTCTCGAGGAACACTTTAAAAGAAGTATTCC
CAAGATCCCCCCAGTAGTAGAGGAGAAAATGAAACCAACCACTACACCTGTATGCGAGAAGCTAAGTGAGAAAGTGAACA
CGTTGGAGGCACTAGTCCGGAAACTACTCGATGAAATAGAGAGAAAAGACCTGTATATAAAAGATCTAGAATTAGAGTTG
AAACTCACGCGCTCTAGGAAGCCAGGGATAGAGGATTACGAGAGAAAGATAAGTGCTTTACAAAACGAATTGGAAGCCTT
AAGGAGGAAAATAGAGGACAAGGACAATGTTATTAGGGAACTATATGAAAAGCTGTTGCAACTGGAGGAACATGTAGTTA
AGCTGGGTCGCGGAGACCTGGTAATGATACCAAAAGTGAGTACCGTGCGGAGAGAGGGGGGACTAGTTAATCGCGGTGTT
TACATGGAGAAGGTATTAGAGATATCAAGCGAGTTGAAGAACATCTTAACCAGTGGAAGGGGCTTCATTGTTTCGCCCGT
GGTGGCAGTCGATCCGTTAAAGGAGAGGATCCCGGTGGTGAAACCGGAGATCATATATGACTTAGGTGACTACGTTATAG
TTGAAAAAGAGGTCATTGAGAAGGCTAACGAGCTCTGGCGTAAAATAGATGAGTTAATCGAGTTGGAGAGACATGAGAGA
ATATTGAGAATGATAGAAGAGTATCAGAGGTCTAGGAAAAACAGCTAG

Upstream 100 bases:

>100_bases
AGAAACCCGGGATACAGGGTCTCAGGATACCCCTCAACACCCCTAAGCCAGATGAAGGTACAACACAGCCAACATAAACT
TAATATCAGACCTGAGTCCC

Downstream 100 bases:

>100_bases
CTTAGTACAGTGTTACTTGATCGTTTAGAACCATCTCGGTGACCCTCTTTATATTAGTGAGTTCTTCATCTGCTATACCA
TGGATCTCGCTCATGATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDN
IYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTR
IVVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK
NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSK
PPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVD
RYQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL
KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGV
YMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHER
ILRMIEEYQRSRKNS

Sequences:

>Translated_655_residues
MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDN
IYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTR
IVVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK
NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSK
PPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVD
RYQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL
KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGV
YMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHER
ILRMIEEYQRSRKNS
>Mature_654_residues
GSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDNI
YELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRI
VVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYKN
VKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSKP
PETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDR
YQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELELK
LTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGVY
MEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERI
LRMIEEYQRSRKNS

Specific function: Unknown

COG id: COG2433

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74348; Mature: 74216

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVE
CCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHEEECCCEEEECHHHH
LYRLLRLVLEYHVDIIAVDNIYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSV
HHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
ARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRIVVTKGRSVTQGGMSRDRFL
HHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHH
RCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK
HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCC
NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDE
CEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHH
IVNLISRIGKPVVVATDVSKPPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYV
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCEE
VNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDRYQLIAEIIRGKPFSEVLEE
EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL
HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VMIPKVSTVRREGGLVNRGVYMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVV
EEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHCCCCC
KPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERILRMIEEYQRSRKNS
CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVE
CCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHEEECCCEEEECHHHH
LYRLLRLVLEYHVDIIAVDNIYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSV
HHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH
ARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRIVVTKGRSVTQGGMSRDRFL
HHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHH
RCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK
HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCC
NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDE
CEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHH
IVNLISRIGKPVVVATDVSKPPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYV
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCEE
VNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDRYQLIAEIIRGKPFSEVLEE
EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL
HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
VMIPKVSTVRREGGLVNRGVYMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVV
EEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHCCCCC
KPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERILRMIEEYQRSRKNS
CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA