| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883337
Identifier: 218883337
GI number: 218883337
Start: 20514
End: 22481
Strand: Direct
Name: 218883337
Synonym: DKAM_0023
Alternate gene names: NA
Gene position: 20514-22481 (Clockwise)
Preceding gene: 218883336
Following gene: 218883340
Centisome position: 1.5
GC content: 43.5
Gene sequence:
>1968_bases GTGGGATCGGGTATAAATAGATGTTTTAAGCTAAGTAACTACCTAGGTGATACCATAGTCGTCACAGTAATCGGCGTGGA TATACAACCTGGTTCATCACCGAATAGCAGAAGGCAACCCCTCTATTCAGCCGTGGTGCTAAGGAATGGAGAGATCATTG CATCCTTTGAGGACGTCGAGTTATATAGATTGCTTAGACTAGTATTGGAGTATCATGTTGATATTATAGCTGTTGACAAC ATATATGAATTAGCCCCCTCTGAGAATGAGTTGAGAAGGATATTTGAGTTGCTCCCTGGAAACGTTAAAGTGGTCCAGGT GACAGGGCCGCCAAATGATGCAAGAGATGTAAATAGTGTGGCAAGGGAGCTAGGGATAGATACGGTGATTGAGACACCGT TGAAGACAGCCTATATAAATGCATTGGCAGCCTATAGGGGTATAGGTTATGAGGTCAGGTTATTTGCTGAGAAAACTAGG ATAGTTGTTACGAAGGGGAGAAGTGTAACACAGGGTGGTATGAGCCGGGATAGATTCCTGAGGTGTATAAGGGCCAGTAT CGCTCAAGCAACAAAGGAGATAAAGCGTATCCTGGATGAGAACAAGCTCGACTATGATATGGTGATAAAGAGGAGCAAGG GAGGCCTTGAGAAAAGCGTGTTCATAGTTTATGCTCCAAGGGAAAGCCTATACGGTTTAATAAAGCCTTTAAAGTACAAG AATGTTAAGATAATTATTAAGCCGTATGCGAGCAGGAAGTCGATAGAGCCAGTAAGCGATCAAGCCAGGAAACCTGTGAT AGTTGGCGTGGATCCAGGCATGAGTATAGGTGTCTCAGTTCTTACGCTAGATGGGGAACCAGTACTCATAACCAGTATGA AGAGCCCTGATAGGGATGAAATAGTCAACTTGATAAGCAGGATTGGTAAACCTGTAGTGGTTGCGACGGATGTTTCAAAA CCGCCTGAAACAGTTGTGAAGCTTGCATCAATGCTTAACGCGGTGCTTTACGTTCCCGAGCAAGATATAACTATCGATGA GAAAAACAGGATAGCTAGGGAATACTCGGAGAAATACGTGGTCAACATACCTGACTCACATACTAGGGATGCCTTGGCAG CTGCTGTAAAGGCGTATAATAATTATAAAGCCACTATTGAAGAAGTGAAATCGAAGCTCGCTAACATGAAAAAAGTAGAT AGGTACCAGCTTATAGCCGAGATAATCAGGGGTAAACCCTTCTCAGAGGTTCTCGAGGAACACTTTAAAAGAAGTATTCC CAAGATCCCCCCAGTAGTAGAGGAGAAAATGAAACCAACCACTACACCTGTATGCGAGAAGCTAAGTGAGAAAGTGAACA CGTTGGAGGCACTAGTCCGGAAACTACTCGATGAAATAGAGAGAAAAGACCTGTATATAAAAGATCTAGAATTAGAGTTG AAACTCACGCGCTCTAGGAAGCCAGGGATAGAGGATTACGAGAGAAAGATAAGTGCTTTACAAAACGAATTGGAAGCCTT AAGGAGGAAAATAGAGGACAAGGACAATGTTATTAGGGAACTATATGAAAAGCTGTTGCAACTGGAGGAACATGTAGTTA AGCTGGGTCGCGGAGACCTGGTAATGATACCAAAAGTGAGTACCGTGCGGAGAGAGGGGGGACTAGTTAATCGCGGTGTT TACATGGAGAAGGTATTAGAGATATCAAGCGAGTTGAAGAACATCTTAACCAGTGGAAGGGGCTTCATTGTTTCGCCCGT GGTGGCAGTCGATCCGTTAAAGGAGAGGATCCCGGTGGTGAAACCGGAGATCATATATGACTTAGGTGACTACGTTATAG TTGAAAAAGAGGTCATTGAGAAGGCTAACGAGCTCTGGCGTAAAATAGATGAGTTAATCGAGTTGGAGAGACATGAGAGA ATATTGAGAATGATAGAAGAGTATCAGAGGTCTAGGAAAAACAGCTAG
Upstream 100 bases:
>100_bases AGAAACCCGGGATACAGGGTCTCAGGATACCCCTCAACACCCCTAAGCCAGATGAAGGTACAACACAGCCAACATAAACT TAATATCAGACCTGAGTCCC
Downstream 100 bases:
>100_bases CTTAGTACAGTGTTACTTGATCGTTTAGAACCATCTCGGTGACCCTCTTTATATTAGTGAGTTCTTCATCTGCTATACCA TGGATCTCGCTCATGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDN IYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTR IVVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSK PPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVD RYQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGV YMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHER ILRMIEEYQRSRKNS
Sequences:
>Translated_655_residues MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDN IYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTR IVVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSK PPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVD RYQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGV YMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHER ILRMIEEYQRSRKNS >Mature_654_residues GSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVELYRLLRLVLEYHVDIIAVDNI YELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSVARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRI VVTKGRSVTQGGMSRDRFLRCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYKN VKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDEIVNLISRIGKPVVVATDVSKP PETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYVVNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDR YQLIAEIIRGKPFSEVLEEHFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELELK LTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDLVMIPKVSTVRREGGLVNRGVY MEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVVKPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERI LRMIEEYQRSRKNS
Specific function: Unknown
COG id: COG2433
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74348; Mature: 74216
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVE CCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHEEECCCEEEECHHHH LYRLLRLVLEYHVDIIAVDNIYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSV HHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH ARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRIVVTKGRSVTQGGMSRDRFL HHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHH RCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCC NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDE CEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHH IVNLISRIGKPVVVATDVSKPPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYV HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCEE VNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDRYQLIAEIIRGKPFSEVLEE EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH HFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VMIPKVSTVRREGGLVNRGVYMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVV EEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHCCCCC KPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERILRMIEEYQRSRKNS CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GSGINRCFKLSNYLGDTIVVTVIGVDIQPGSSPNSRRQPLYSAVVLRNGEIIASFEDVE CCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHEEECCCEEEECHHHH LYRLLRLVLEYHVDIIAVDNIYELAPSENELRRIFELLPGNVKVVQVTGPPNDARDVNSV HHHHHHHHHHHCCCEEEECCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH ARELGIDTVIETPLKTAYINALAAYRGIGYEVRLFAEKTRIVVTKGRSVTQGGMSRDRFL HHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHH RCIRASIAQATKEIKRILDENKLDYDMVIKRSKGGLEKSVFIVYAPRESLYGLIKPLKYK HHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEECCHHHHHHHHCCCCCC NVKIIIKPYASRKSIEPVSDQARKPVIVGVDPGMSIGVSVLTLDGEPVLITSMKSPDRDE CEEEEEEECCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEECCCEEEEEECCCCCHHH IVNLISRIGKPVVVATDVSKPPETVVKLASMLNAVLYVPEQDITIDEKNRIAREYSEKYV HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCEE VNIPDSHTRDALAAAVKAYNNYKATIEEVKSKLANMKKVDRYQLIAEIIRGKPFSEVLEE EECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH HFKRSIPKIPPVVEEKMKPTTTPVCEKLSEKVNTLEALVRKLLDEIERKDLYIKDLELEL HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE KLTRSRKPGIEDYERKISALQNELEALRRKIEDKDNVIRELYEKLLQLEEHVVKLGRGDL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VMIPKVSTVRREGGLVNRGVYMEKVLEISSELKNILTSGRGFIVSPVVAVDPLKERIPVV EEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHCCCCC KPEIIYDLGDYVIVEKEVIEKANELWRKIDELIELERHERILRMIEEYQRSRKNS CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA