| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is glmM [H]
Identifier: 218883326
GI number: 218883326
Start: 9687
End: 11063
Strand: Reverse
Name: glmM [H]
Synonym: DKAM_0012
Alternate gene names: 218883326
Gene position: 11063-9687 (Counterclockwise)
Preceding gene: 218883327
Following gene: 218883325
Centisome position: 0.81
GC content: 43.43
Gene sequence:
>1377_bases ATGAGCGATCCCCGGAGACTTTTCGGAACCGATGGAGTCAGAGGGGTTGTAAACGAAGACTTAAACCCGGAATTTATACT GAGACTCGGGCTAGCAATAGGCTCCTATTTTGATAAAGGCTCCAGGGTACTTATTGGGATGGATTCAAGGGCTGGGGGCG AGATAATTAAGGGCATTGTTTCAGCAGCACTAATGTCAACAGGTGTAAAGGTATATGATGCTGGATTCACCCCCACACCA GCCCTTCAATACGTTGTCAAATCTAATGGCTTTGATGGAGGAGTTATGATTACAGCCAGCCATAACCCTCCCGAATATAA CGGGATAAAGGTGATCGGCCCCTACGGAATCGAGATCAATAGGGATGAAGAAAGAAAGATAGAAGAGATATATTGGGAAA GCAATTTCAGGAGGGTTAACTGGAGTAGTCTACCGTATAGTGTAGAGAAACATAAGATGGTTAACGAGGAATACGTGAAA GCTGTGTTAAGCCATATAGATAAGGACCTTATTAGAGCCAAGAACTATAGGGTACTCATAGATCCAGCTAATAGTGTTGG CGCATTAACAACGCCGCTAATAGTTAAGGAACTAGGTGCAAAACCAATTGTAATTAATGGAACACTAGATCCCTTATTCC CTGGGAGAAACCCTGAGCCAACAGTTGAAAACCTGGCTGAAACAGCGAAGGTAACAAGGGAGTTAGGAGTCGCATTAGGT ATCGCACATGACGCTGATGCCGATAGAGCTATAATAATAGATGAAAAAGGCGTTGTCAACTGGGGAGATCGAACAGCAAC GCTTCTAGCTAAATATCTGAAAGAGGAGAAGGGATTAAGTGGGAAGGTCTATACTGCTGTATCATCCAGCATAATGGTGG AGGAGGTTTTGAAACCCCTCAACATAGAGGTTGCCTGGCTTAAAGTGGGTAGTGTCGATATAGCTCACACCATGAGAAGG AATGGTGATGCCTTATGTGGATTCGAGGAGAACGGTGGATTCATGTATCCACCCCACCAATATGTACGTGATGGAGGAAT GACCACTGCATTATTTCTCGAGATGATGGCCAGGTACAATGCATCAGCATCACAATTATTCGATAAGCTACCAAAGTATT ATACCTTGAAAAAGAAGTATAAGATGGATCGTGAGAAGGCTTTAAGAGTGGTTGAACTAGTTAAAGAAGCGTTTAAGGAT AAACGGTTAATAACGATCGATGGTGTAAAAGTCATCTCATCCAATTACTGGTTTCTAGTGCGGCCAAGCGGTACGGAACC CTTGCTCCGAGTAATGATCGAGGCTAAGGATGTTGAACGATTGAATGAGATATCATCATCGATTGATTCGATAATAAGGG AGGTGGTAGGTAAGTGA
Upstream 100 bases:
>100_bases AATGGGCTGAGTCGAGAAATCTCATAACTATCTTTGAGTTAAGAGAGGGTAGTGCCGAGTTATTATCTCTCGTAGAGGAA TATATGGAGGGGTTAAATGA
Downstream 100 bases:
>100_bases TGAGATATTGGGGGCTAGATGTCCTAGTATGCGTGCACTGTAAACATCACCCATTAGAGATTACAGTAATAGAATCCGAA ACCCAAGAGATAAACACAGA
Product: phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSDPRRLFGTDGVRGVVNEDLNPEFILRLGLAIGSYFDKGSRVLIGMDSRAGGEIIKGIVSAALMSTGVKVYDAGFTPTP ALQYVVKSNGFDGGVMITASHNPPEYNGIKVIGPYGIEINRDEERKIEEIYWESNFRRVNWSSLPYSVEKHKMVNEEYVK AVLSHIDKDLIRAKNYRVLIDPANSVGALTTPLIVKELGAKPIVINGTLDPLFPGRNPEPTVENLAETAKVTRELGVALG IAHDADADRAIIIDEKGVVNWGDRTATLLAKYLKEEKGLSGKVYTAVSSSIMVEEVLKPLNIEVAWLKVGSVDIAHTMRR NGDALCGFEENGGFMYPPHQYVRDGGMTTALFLEMMARYNASASQLFDKLPKYYTLKKKYKMDREKALRVVELVKEAFKD KRLITIDGVKVISSNYWFLVRPSGTEPLLRVMIEAKDVERLNEISSSIDSIIREVVGK
Sequences:
>Translated_458_residues MSDPRRLFGTDGVRGVVNEDLNPEFILRLGLAIGSYFDKGSRVLIGMDSRAGGEIIKGIVSAALMSTGVKVYDAGFTPTP ALQYVVKSNGFDGGVMITASHNPPEYNGIKVIGPYGIEINRDEERKIEEIYWESNFRRVNWSSLPYSVEKHKMVNEEYVK AVLSHIDKDLIRAKNYRVLIDPANSVGALTTPLIVKELGAKPIVINGTLDPLFPGRNPEPTVENLAETAKVTRELGVALG IAHDADADRAIIIDEKGVVNWGDRTATLLAKYLKEEKGLSGKVYTAVSSSIMVEEVLKPLNIEVAWLKVGSVDIAHTMRR NGDALCGFEENGGFMYPPHQYVRDGGMTTALFLEMMARYNASASQLFDKLPKYYTLKKKYKMDREKALRVVELVKEAFKD KRLITIDGVKVISSNYWFLVRPSGTEPLLRVMIEAKDVERLNEISSSIDSIIREVVGK >Mature_457_residues SDPRRLFGTDGVRGVVNEDLNPEFILRLGLAIGSYFDKGSRVLIGMDSRAGGEIIKGIVSAALMSTGVKVYDAGFTPTPA LQYVVKSNGFDGGVMITASHNPPEYNGIKVIGPYGIEINRDEERKIEEIYWESNFRRVNWSSLPYSVEKHKMVNEEYVKA VLSHIDKDLIRAKNYRVLIDPANSVGALTTPLIVKELGAKPIVINGTLDPLFPGRNPEPTVENLAETAKVTRELGVALGI AHDADADRAIIIDEKGVVNWGDRTATLLAKYLKEEKGLSGKVYTAVSSSIMVEEVLKPLNIEVAWLKVGSVDIAHTMRRN GDALCGFEENGGFMYPPHQYVRDGGMTTALFLEMMARYNASASQLFDKLPKYYTLKKKYKMDREKALRVVELVKEAFKDK RLITIDGVKVISSNYWFLVRPSGTEPLLRVMIEAKDVERLNEISSSIDSIIREVVGK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=468, Percent_Identity=28.4188034188034, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1788361, Length=457, Percent_Identity=25.164113785558, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1786904, Length=507, Percent_Identity=24.4575936883629, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993870, Length=476, Percent_Identity=24.1596638655462, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 50877; Mature: 50746
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPRRLFGTDGVRGVVNEDLNPEFILRLGLAIGSYFDKGSRVLIGMDSRAGGEIIKGIV CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH SAALMSTGVKVYDAGFTPTPALQYVVKSNGFDGGVMITASHNPPEYNGIKVIGPYGIEIN HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEC RDEERKIEEIYWESNFRRVNWSSLPYSVEKHKMVNEEYVKAVLSHIDKDLIRAKNYRVLI CCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DPANSVGALTTPLIVKELGAKPIVINGTLDPLFPGRNPEPTVENLAETAKVTRELGVALG ECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE IAHDADADRAIIIDEKGVVNWGDRTATLLAKYLKEEKGLSGKVYTAVSSSIMVEEVLKPL ECCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCC NIEVAWLKVGSVDIAHTMRRNGDALCGFEENGGFMYPPHQYVRDGGMTTALFLEMMARYN CEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCEECCCHHHHHCCCCHHHHHHHHHHHCC ASASQLFDKLPKYYTLKKKYKMDREKALRVVELVKEAFKDKRLITIDGVKVISSNYWFLV CCHHHHHHHCCHHEEHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCEEEEE RPSGTEPLLRVMIEAKDVERLNEISSSIDSIIREVVGK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDPRRLFGTDGVRGVVNEDLNPEFILRLGLAIGSYFDKGSRVLIGMDSRAGGEIIKGIV CCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH SAALMSTGVKVYDAGFTPTPALQYVVKSNGFDGGVMITASHNPPEYNGIKVIGPYGIEIN HHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCEEC RDEERKIEEIYWESNFRRVNWSSLPYSVEKHKMVNEEYVKAVLSHIDKDLIRAKNYRVLI CCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DPANSVGALTTPLIVKELGAKPIVINGTLDPLFPGRNPEPTVENLAETAKVTRELGVALG ECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE IAHDADADRAIIIDEKGVVNWGDRTATLLAKYLKEEKGLSGKVYTAVSSSIMVEEVLKPL ECCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCC NIEVAWLKVGSVDIAHTMRRNGDALCGFEENGGFMYPPHQYVRDGGMTTALFLEMMARYN CEEEEEEEECCCHHHHHHHCCCCEEEEEECCCCEECCCHHHHHCCCCHHHHHHHHHHHCC ASASQLFDKLPKYYTLKKKYKMDREKALRVVELVKEAFKDKRLITIDGVKVISSNYWFLV CCHHHHHHHCCHHEEHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCEEEEECCEEEEE RPSGTEPLLRVMIEAKDVERLNEISSSIDSIIREVVGK ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA