Definition Desulfatibacillum alkenivorans AK-01 chromosome, complete genome.
Accession NC_011768
Length 6,517,073

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Identifier: 218782645

GI number:

Start: 5947759

End: 5948979

Strand: Direct

Name: Not Available

Synonym: Dalk_4818

Alternate gene names: NA

Gene position: NA

Preceding gene: 218782644

Following gene: 218782646

Centisome position: NA

GC content: NA

Gene sequence:

>1221_bases
ATGGCGACATATAATTATACGGCGATGAATGAAGTGGGAACCAAGGTGTCAGGCACGCTGGAGGCGGAGACCTCCGACGG
CGCCCGGCGGATTTTGAGCTCCCGAGGCTTCATTCCCACCAAGGTCACCAAAACCCGTGGAGAGGAGAAAGCGCAAAAGG
AAAGCCTGGGCGACAGGCTGAGCCGGGTGGGGGCCAGGGATATTATCCTGTTCACCAAGCAGTTCGCCACCATGCTTAGG
GCGGGCATTCCCATTATCGACCTGTTTAAAGTGGCCGAATCCCAGACCGAAAATCCCAAGCTGAAAAAAGTCATTGCAGT
CATTTCCAAGGACATCCAGGAGGGCGCCAGCCTCCATCAGGCCATGAAAAAGCACCCTTCGGTTTTTTCCCCCTTGTATT
TAAGCATGATGCGCGCCGGCGAAACCAGCGGGGCTCTGCCCCAGGTTTTGGAACGCCTGATTTACATCATCGACCATGAG
GAAAAGGTCAAAAAGGACATCCGGGGCGCCATGATTTATCCGGCCTTGGTTACCATCGTTCTAACGGGGGCCTTCTTTCT
TTTGGAAATCAAGGTGGTGCCTGTTTTCGCTAAAATGTTCAGTAGAGCGAAAATCGACTTACCTCTGCCTACTAAAATCT
GTATAGAAATTTACACTTTTTTGGCTACATATTGGCCTTTTTTAATTGGCGGTATAGTTGCTGCCTCAATAGCCTTGTAT
TTTTATTTAAGAACGGAGCAGGGAAAATATACTTTCAATAGTATAATACTCCAATTCCCCATATTCGGCGACTTATTCCT
GAAAGCAGCTATGTCGCGCTTTGCAAGCATCTTTGCTATTTTGCAATCCAGCGGGGTGACCGTGTTGGATTCGTTTACTA
TTTTATCCGGCACCATAGGCAGCGCCGCCATGTCCCGGCAATTTGACGGCATCCGCCAGCGTTTGGAGCAAGGGCAGGGG
ATTTCCGCTCCTTTAAGGGAGGCGAAGTTTTTTCCTCCCATGGTCATCAATATGGTGGCCATTGGCGAAGAGTCGGGAAA
CCTGGAGGAGATGCTTCAGGTGATTTCCGACCACTATGACGACGAAGTGGAATATGCCGTAAAAGCGCTTTCGGAAGCCA
TTGTACCGATTTTGACAATAGCATTAGCAGCGGTTGTTGGTTTTTTTGCCCTGGCCATTTTTCTGCCCATGTGGGATATG
ACCAAAATGGTCAAACATTAA

Upstream 100 bases:

>100_bases
TTGCGGGAAGACGCCCTGGACAAGGTGTTTGCAGGACGAACCACCCTGGAAGAAGCGGCCTCTGCAGTTATGACTTAAGA
ACAAGGCGACAGGAAGCATC

Downstream 100 bases:

>100_bases
AATTTCGGAGTTTTTATATTTGCATAATATTTGGGGTCGGAAAATCACGGCTAACGCATTATAAAAAATGAAAAAATCCT
TATATCATATTAAGTTGTAT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>406_residues
MATYNYTAMNEVGTKVSGTLEAETSDGARRILSSRGFIPTKVTKTRGEEKAQKESLGDRLSRVGARDIILFTKQFATMLR
AGIPIIDLFKVAESQTENPKLKKVIAVISKDIQEGASLHQAMKKHPSVFSPLYLSMMRAGETSGALPQVLERLIYIIDHE
EKVKKDIRGAMIYPALVTIVLTGAFFLLEIKVVPVFAKMFSRAKIDLPLPTKICIEIYTFLATYWPFLIGGIVAASIALY
FYLRTEQGKYTFNSIILQFPIFGDLFLKAAMSRFASIFAILQSSGVTVLDSFTILSGTIGSAAMSRQFDGIRQRLEQGQG
ISAPLREAKFFPPMVINMVAIGEESGNLEEMLQVISDHYDDEVEYAVKALSEAIVPILTIALAAVVGFFALAIFLPMWDM
TKMVKH

Sequences:
NA

Specific function: NA

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA