Definition Desulfatibacillum alkenivorans AK-01 chromosome, complete genome.
Accession NC_011768
Length 6,517,073

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Identifier: 218781231

GI number:

Start: 4302420

End: 4305527

Strand: Direct

Name: Not Available

Synonym: Dalk_3392

Alternate gene names: NA

Gene position: NA

Preceding gene: 218781219

Following gene: 218781233

Centisome position: NA

GC content: NA

Gene sequence:

>3108_bases
ATGAACACACAATCGATTCCCCCGAACAACCTCCAAAGAATTCAGGAAGTCGCCGCGCTTATGGAAGGGGAATTCAATGT
GGACTGGTTGGCGGAACTGACCGGCCTTAAAGCCCACCAGGTCCTGGCCGAGTTACAGAGCATTGTGGACCAAAGAATTC
TCACCTCTCCCCAACCAGGCATCTATGCCTTCCGGGCGCCCGCCAAGCGAGAGCAATGGACCACGCACATGAAACCGGAT
GCCAAAGCTTCGGTGCATAAACGGATCGCTGCTTTGCTCATGGAAGACCTGCCTGACAATGACGAGAAATACGAGCGTGT
GGCCCACCACCTCATCCATATTGCTAACGACATTAATGGCTGCCGCATATTGTGTCGGGCCGGGGATGTTCATCGTCGAT
CCTTTCGCACAGAACAGGCTTTCCAGTGTTTCCACAAAGCCTTATTGGACCTGGATCATCAAAGCGGTGAAACAGCAGAC
CAGCTTTTTGTGGAAACAGCCATCAAATACTCAAAAATTTCCACGGCCCGCCATGATACCACATGGGTGCTGGCCCTGCT
CAATCGTGCCATGAAACGGGCGAAAAGGCGCCATAGCGGCGCTGACAGCGCCTTACTGGAAATGCATATCGCAAAAAACG
AGTGGCTGAGCGCCAATTATGACCAGGCCCTGGCCCATTTTGAAAAGGGATGGGCCCTGGCCAAAACCATAGACGACCCT
CACCTGGCAGATGCCATGACCGCCTTCAGCACCTTTTTTCTTTATTGGGAGGGACGGTTTACCGAGGCCGTGGAAAGCTA
TGAGCGGGTGGTGACCGGAGTTGAGCAATATCCCCGTTCCCGCTTTCCCCTGTTGGGCGCCATTACAGTGGGTTATAGCT
ACGCCCAGGTGGGCAACTACGCCCAGGGAATTGGAATGCTGGATTCTATCCGTACCCATTGCCTGGAAAAGGGAGACTTA
TACCTGGCCTCCTACGCCATCGGAAACATTGGTGAGATCATGCTCAAGCTGGGGCGTTTGGATGAGGCCCTCGTTTATAT
GGAGATGAGTCTGAAGCTGGCCCGGGAAACCAATAACCGCTGGGTTTGGATGATACTCCAAATTTTTCTGGCCTACACTT
TTTTCCAACTAGGCAAAAAAAAGCGGACAGCCTTGCATTTGCAAAAATTTCTGGAGTATCGGGAAGAGGCCCAGGCCATG
GTCTTGCCCTATTCCTACCTGCTTCATTTGGCACTGGCCATGGAAAAGGGAGACCTTGCCCCGGTATCGGGGCTTTCCCT
GGAGGTCGAAATCCAGCGTATGCAATGCTCCAACAATATATACATGAAAGGCATAGGGGCGCGATTTGCGGCTCTGAAAC
TGGAGCAGGAAAACAGCCCACCGGGAAAAGTCAGGGAGGCCTTTGAAACCTCCATTCGATACCTGGAAATGGCGGGAAAC
CAGATGTCCCTGATTCGATCCCGCCTGGAAACAGCCCGTTATCTGAGAAAAATAGGGGATCCGGGAGCTGGGGATAAACT
CACTACTCAGGTCTCCCAAAGCCTGGCTTCCATGGATGAGAAATTGGTGCCCGATGACCTGCGCCACATGGTGAGCCGGG
ATGGCAATTCCAAAAAGCTACTTCGGGAAATCCTGGAGTTGGGACAGGAATTGGTCAAGATCCGTGACTATCATGAACTG
GTACAACGCATTATTTCCACTGGCAACCGGGTGACAGGGGCGGAACGGGGCGCCATTTTTATGAGTGAAAAAGGCAATTC
AGGCAAGGAGGAATTGCGCCTGAAGGCGTCCCGCAACCTCACCAGCGATCATGTGGCCAACCCTTCCTTTGTCTCATCCA
TGAAAATGATAGAAATGGTGGCGGCCTCGGGCAGGGGCCTGATTGCAGGGGTGGAGTCCACGGATACGGAAGGATACAGC
AGCGAAGGGGCTATCCAGTCCAAAATATGTGTTCCCCTTTGCCTGCATGACCAGGTAGTGGGGGTGCTCTATCATGACAA
TCGCCTGTTGGCCAGCGCATTCCGGGAAGAAGACCTGGATGTCCTGTCGTATTTTTCGGCCTTAGCGGCTATTGCCCTGG
ATAATGCTCGGGCCTATGATCAGATTCGTCGTTGGAACATCAAACTAAGCCGAGAAAAACAATATTATGAAGAAGCTCAT
CTCAGTTATCTCCAGTTTGATGAAATTGTTGGGCATAGCCCAGCCATTAATGAAGTTTTATCTAAGATTGAGCAGGTCGC
CAACACAGAAACCACTGTACTCATAACCGGGGAAACTGGCGTGGGCAAGGAGTTAGTGGCACGGGCCATCCAAAAGCACA
GCAGCCGTGCTCAGCAACCTTTTATTGGGGTTCAGCTCAGCGCCCTTCCTAAGGATTTGATGGCCAGCGAATTGCTGGGT
CATGAAAAGGGCGCGTTTACAGGGGCAACCCACCGTCAGGCGGGACGACTGGAACTAGCTGATGGGGGCACATTGTTCCT
GGATGAAATTGGGGACATTTCCCACGACATCCAAATTCGCCTGCTGCGGGTTCTCCAGACCCGGCAGTTTGAACGGGTGG
GGGGAATGAAAACCCTGTCTTCTGATTTCCGTCTCATTGCGGCCACTAACCGGGAGTTGGAGTCCCTGGTAAGGGACGGC
CGCTTCAGAGCGGATCTGTACTATCGGCTAAACGTGTTCCCCATATATGTTCCACCGCTAAGGGATCGGCGGGAGGATAT
TCCGCTGCTGGCTATGCACTTCCTCAAGCTCCATGCAGCCAAGTTGAATAAACAGGTCATGCGAATTTCCGACCGGGAAA
TGGATATGCTTAAGGAATATGACTGGCCAGGTAATGTCCGGGAACTGAAAAATGTGGTGGAAAGGGGAGTTATTTTGAGT
ACCAACAGGGACTTTCGGATGCCAGAGCTCCAAAGCGGCGATTGCCCCCCCCTGACCGTGGGCGATACCGCCACTTTGGC
GGAAAATGAGCGATCCCACATATTGCGTATACTCAAGCGGACGGGCTGGAAAGTCGCGGGCGCTTCCGGTGCAGCAAAAA
TTTTGGATATCCCCCCGTCCACTCTGTCATTTCGTATGAACAAGCTGGGAATCAAGCGTCCAGGATGA

Upstream 100 bases:

>100_bases
CTGTGTTTTCTTTCTCAGCATATGATGAATTTTTGACAATCAGGTCTGAAACTGCTAACCATAGATAGTCAAACCTGCTT
GACACTTAAGGAGCCTCTCC

Downstream 100 bases:

>100_bases
ATACTTTACACTACCCGCAAGATGAGGACTCTTGATATATTGGGTTATGTATGGCACTTTTCCCTTTGATAAAACCAACA
ACCTGTGCCACCGCCAGTTT

Product: NifA subfamily, Fis Family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1035_residues
MNTQSIPPNNLQRIQEVAALMEGEFNVDWLAELTGLKAHQVLAELQSIVDQRILTSPQPGIYAFRAPAKREQWTTHMKPD
AKASVHKRIAALLMEDLPDNDEKYERVAHHLIHIANDINGCRILCRAGDVHRRSFRTEQAFQCFHKALLDLDHQSGETAD
QLFVETAIKYSKISTARHDTTWVLALLNRAMKRAKRRHSGADSALLEMHIAKNEWLSANYDQALAHFEKGWALAKTIDDP
HLADAMTAFSTFFLYWEGRFTEAVESYERVVTGVEQYPRSRFPLLGAITVGYSYAQVGNYAQGIGMLDSIRTHCLEKGDL
YLASYAIGNIGEIMLKLGRLDEALVYMEMSLKLARETNNRWVWMILQIFLAYTFFQLGKKKRTALHLQKFLEYREEAQAM
VLPYSYLLHLALAMEKGDLAPVSGLSLEVEIQRMQCSNNIYMKGIGARFAALKLEQENSPPGKVREAFETSIRYLEMAGN
QMSLIRSRLETARYLRKIGDPGAGDKLTTQVSQSLASMDEKLVPDDLRHMVSRDGNSKKLLREILELGQELVKIRDYHEL
VQRIISTGNRVTGAERGAIFMSEKGNSGKEELRLKASRNLTSDHVANPSFVSSMKMIEMVAASGRGLIAGVESTDTEGYS
SEGAIQSKICVPLCLHDQVVGVLYHDNRLLASAFREEDLDVLSYFSALAAIALDNARAYDQIRRWNIKLSREKQYYEEAH
LSYLQFDEIVGHSPAINEVLSKIEQVANTETTVLITGETGVGKELVARAIQKHSSRAQQPFIGVQLSALPKDLMASELLG
HEKGAFTGATHRQAGRLELADGGTLFLDEIGDISHDIQIRLLRVLQTRQFERVGGMKTLSSDFRLIAATNRELESLVRDG
RFRADLYYRLNVFPIYVPPLRDRREDIPLLAMHFLKLHAAKLNKQVMRISDREMDMLKEYDWPGNVRELKNVVERGVILS
TNRDFRMPELQSGDCPPLTVGDTATLAENERSHILRILKRTGWKVAGASGAAKILDIPPSTLSFRMNKLGIKRPG

Sequences:
NA

Specific function: NA

COG id: COG3604

COG function: function code KT; Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA