| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is purE [H]
Identifier: 218710992
GI number: 218710992
Start: 3256700
End: 3257185
Strand: Direct
Name: purE [H]
Synonym: VS_3120
Alternate gene names: 218710992
Gene position: 3256700-3257185 (Clockwise)
Preceding gene: 218710987
Following gene: 218710993
Centisome position: 98.71
GC content: 49.59
Gene sequence:
>486_bases ATGACTGTCGGTATTATCATGGGTTCTAAATCTGATTGGCCAACAATGAAGCTAGCTGCAGAAATGTTGGATCAGTTTGG CGTGGCGTACGAAACAAAAGTGGTTTCTGCTCACCGCACACCTCAGTTGCTTGCAGACTACGCAACCAGTGCGAAAGAGC GCGGTATTAAAGTGATTATTGCTGGTGCTGGCGGTGCAGCGCACCTTCCGGGCATGGCGGCTGCTTTCACAAGCGTACCA GTTCTGGGTGTTCCAGTTCAGTCTAAAGCACTGAAAGGCATGGACTCTCTGCTTTCTATCGTGCAGATGCCAAAAGGTAT CGCGGTAGGTACTTTGGCTATCGGTGAAGCTGGCGCTGCCAATGCAGGCATCCTAGCGGCTCAAATCATTGGTACACACA ATGAAGAAGTAATGGCAAAAGTAGAAGCGTTCCGCTCTGAACAAACAGAAACGGTTCTGGCTAATCCAAACCCTGCAGAG GACTAA
Upstream 100 bases:
>100_bases CAACTTAGACTGACGCAAACGTTTTCCTTAGGCGATTTTACCCGTATAATGCGCGCAAAATATCTAATCACTAATTAAAT CGTACCTGAAGGAGTTTGAG
Downstream 100 bases:
>100_bases TTTCCATGCATGTTCTTGTGTTAGGCGCGGGCCAACTTGCTCGCATGATGTCCCTAGCTGGGGCACCGCTGAATATTGAA ATTTCTGCTTTTGATGTTGG
Product: phosphoribosylaminoimidazole carboxylase catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTVGIIMGSKSDWPTMKLAAEMLDQFGVAYETKVVSAHRTPQLLADYATSAKERGIKVIIAGAGGAAHLPGMAAAFTSVP VLGVPVQSKALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTHNEEVMAKVEAFRSEQTETVLANPNPAE D
Sequences:
>Translated_161_residues MTVGIIMGSKSDWPTMKLAAEMLDQFGVAYETKVVSAHRTPQLLADYATSAKERGIKVIIAGAGGAAHLPGMAAAFTSVP VLGVPVQSKALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTHNEEVMAKVEAFRSEQTETVLANPNPAE D >Mature_160_residues TVGIIMGSKSDWPTMKLAAEMLDQFGVAYETKVVSAHRTPQLLADYATSAKERGIKVIIAGAGGAAHLPGMAAAFTSVPV LGVPVQSKALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTHNEEVMAKVEAFRSEQTETVLANPNPAED
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=156, Percent_Identity=64.1025641025641, Blast_Score=169, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6324702, Length=151, Percent_Identity=54.9668874172185, Blast_Score=165, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16541; Mature: 16410
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGIIMGSKSDWPTMKLAAEMLDQFGVAYETKVVSAHRTPQLLADYATSAKERGIKVII CEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHCCEEEEE AGAGGAAHLPGMAAAFTSVPVLGVPVQSKALKGMDSLLSIVQMPKGIAVGTLAIGEAGAA ECCCCCCCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC NAGILAAQIIGTHNEEVMAKVEAFRSEQTETVLANPNPAED CCCHHEEHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure TVGIIMGSKSDWPTMKLAAEMLDQFGVAYETKVVSAHRTPQLLADYATSAKERGIKVII EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHCCEEEEE AGAGGAAHLPGMAAAFTSVPVLGVPVQSKALKGMDSLLSIVQMPKGIAVGTLAIGEAGAA ECCCCCCCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC NAGILAAQIIGTHNEEVMAKVEAFRSEQTETVLANPNPAED CCCHHEEHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]