| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710929
Identifier: 218710929
GI number: 218710929
Start: 3177511
End: 3178023
Strand: Reverse
Name: 218710929
Synonym: VS_3032
Alternate gene names: NA
Gene position: 3178023-3177511 (Counterclockwise)
Preceding gene: 218710930
Following gene: 218710928
Centisome position: 96.32
GC content: 50.29
Gene sequence:
>513_bases TTGATGACGATGACGAATTCTCAAGTACACCCAACATGGCAACTAGATCTAGAAACTGGTGCGTTAGTGCTTACTCCGTG CCCAGGCACTAAAGACGCTGACCTAGATGCATCTCTAGCGCAACTGAAAGCACAAGGCGTTGAAGCGATCGTGACAGCAC TTGATGACCATGAGCTTGCAAGCAAAGACGTAGCGGCACTTGGTGAGAAGACACGTGCGCTAGGCATGCAATGGTTCCAA ATAGAAATCGAAGACGATTGTGCACCGGGTACCGATTTTGCTGCGAAGTGGCGGGCGACTAGTCCAGTTTTACACCAAAT TGTGGATAACGGCGGCAAGGTAGTAATGCACTGCATGGGCGGTTCTGGCCGTACTGGTTTGCTGGCTGCACACCTGTTGT TAGAGAAGAGCTGGGACATGAACAAGATTGTTCAAGAGGTGCAGGCACTGCGTCCGGGCGCATTTACTAAGCCCATTCAG GTTGAATATATTAATGGCGTAGCGAACGGCTAA
Upstream 100 bases:
>100_bases ACATAGAACCCCTATGCTCATAGGGCTGAACTTACTGGTTGCCTAGCTGCAACTCCAATTATTTTGAGTATCGGTCTATA TACAAAAGAATTTTAAGAGA
Downstream 100 bases:
>100_bases TAAACCATTGTTGTTATACAAGGGGCTTTTGGTATCTGGAGTGTTGAACTTATCATGATCCAAAAGCTCTTTTTGTTTAG ATTGCAGAGATAGCGTTATG
Product: putative phosphatase
Products: NA
Alternate protein names: Phosphatase; Protein Tyrosine Phosphatase; ADP-Ribosyl-(Dinitrogen Reductase) Hydrolase; Phosphatase Family Protein; Protein-Tyrosine Phosphatase; ADP-Ribosyl Glycohydrolase Family Protein; Protein Tyrosine Phosphatase Catalytic Region
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MMTMTNSQVHPTWQLDLETGALVLTPCPGTKDADLDASLAQLKAQGVEAIVTALDDHELASKDVAALGEKTRALGMQWFQ IEIEDDCAPGTDFAAKWRATSPVLHQIVDNGGKVVMHCMGGSGRTGLLAAHLLLEKSWDMNKIVQEVQALRPGAFTKPIQ VEYINGVANG
Sequences:
>Translated_170_residues MMTMTNSQVHPTWQLDLETGALVLTPCPGTKDADLDASLAQLKAQGVEAIVTALDDHELASKDVAALGEKTRALGMQWFQ IEIEDDCAPGTDFAAKWRATSPVLHQIVDNGGKVVMHCMGGSGRTGLLAAHLLLEKSWDMNKIVQEVQALRPGAFTKPIQ VEYINGVANG >Mature_170_residues MMTMTNSQVHPTWQLDLETGALVLTPCPGTKDADLDASLAQLKAQGVEAIVTALDDHELASKDVAALGEKTRALGMQWFQ IEIEDDCAPGTDFAAKWRATSPVLHQIVDNGGKVVMHCMGGSGRTGLLAAHLLLEKSWDMNKIVQEVQALRPGAFTKPIQ VEYINGVANG
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18265; Mature: 18265
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTMTNSQVHPTWQLDLETGALVLTPCPGTKDADLDASLAQLKAQGVEAIVTALDDHELA CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH SKDVAALGEKTRALGMQWFQIEIEDDCAPGTDFAAKWRATSPVLHQIVDNGGKVVMHCMG HHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHCCCCEEEEEEEC GSGRTGLLAAHLLLEKSWDMNKIVQEVQALRPGAFTKPIQVEYINGVANG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MMTMTNSQVHPTWQLDLETGALVLTPCPGTKDADLDASLAQLKAQGVEAIVTALDDHELA CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH SKDVAALGEKTRALGMQWFQIEIEDDCAPGTDFAAKWRATSPVLHQIVDNGGKVVMHCMG HHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHCCCCCCHHHHHHHCCCCEEEEEEEC GSGRTGLLAAHLLLEKSWDMNKIVQEVQALRPGAFTKPIQVEYINGVANG CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA