Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710869

Identifier: 218710869

GI number: 218710869

Start: 3112704

End: 3113402

Strand: Reverse

Name: 218710869

Synonym: VS_2953

Alternate gene names: NA

Gene position: 3113402-3112704 (Counterclockwise)

Preceding gene: 218710870

Following gene: 218710866

Centisome position: 94.37

GC content: 41.92

Gene sequence:

>699_bases
ATGAAAAAAGCATTTCTTCTCGTTTCACTATTATCTACATTTCTCATTGGCTGTTCATCAACCAGCCCTCGCAAAAACCT
AGAGCAATTTGAAACTCACACCGGCGGCCAAGTCATGGGCGACGCGACAAGTTTCTACTGGGTTACAAATAAGCTAACAC
AACCTCATACTTCAGCTGACTACGTCACTGTAGGCGATTACGGCTGGTACCAAACCGACTATGCTTGGTCGGAAGGTATA
CTTCGTGAATTTATTCGTGAAGGTGAGCAACGTAATTCTTCTAATGAGCTGGTTCCGTATAGTGTCCATGTGCGTTTTAA
TAAGTCAGGCGAAGCTGTATATCAGCAGTATCGTATTGATAGCAAAATTTTACCTATCCAAGTTAAGCAACTCGAAAGCT
ACCAGAAAGAAGCCAAGTCGGTTTTAGAAACTACGATGAAGCAGCATGACGAAGGGCTCAGACTGGTTCAGGGTTACTGG
AATGGCAAAACGTTCCAGACTTGCTCTGGTAAGCAATTTTCTGACATTGAATTTAATCAAACACTACCTAATTTTGTGAT
TAACCGTTTGTCGTCTGTAGAGAGCTATGGTGCTTTTGTCGGCAAGGAGTCTCTCAGAAAACTATCTGTTGCTGAATTTT
TGATGTTGGCAGATGACAACCATCAGTGTGTTACAAGACCATCATTGTTGAAAGAATAG

Upstream 100 bases:

>100_bases
CAAATGTTCCAGCATTTGTTGCAGGTAAAGCGCTGAAAGATTCAGTGAAATAATCTAAACTGTACCGAGGTAGTCGTATT
CCACCTCGGTACAGGTTTTT

Downstream 100 bases:

>100_bases
AGCGTATTTAAAAGGGTTCAGAGAATTTACCCGCTGTAGGTCAGTGCTTATTTGTGTGTACAGGAACAGACCCCAGAACA
GATTAAGCAATAAAAAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI
LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW
NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE

Sequences:

>Translated_232_residues
MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI
LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW
NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE
>Mature_232_residues
MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI
LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW
NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26529; Mature: 26529

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSAD
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCC
YVTVGDYGWYQTDYAWSEGILREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRID
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHCC
SKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYWNGKTFQTCSGKQFSDIEFNQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCEEECCCCCCCCCCCHHH
TLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCHHHCC
>Mature Secondary Structure
MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSAD
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCC
YVTVGDYGWYQTDYAWSEGILREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRID
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHCC
SKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYWNGKTFQTCSGKQFSDIEFNQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCEEECCCCCCCCCCCHHH
TLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA