| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710869
Identifier: 218710869
GI number: 218710869
Start: 3112704
End: 3113402
Strand: Reverse
Name: 218710869
Synonym: VS_2953
Alternate gene names: NA
Gene position: 3113402-3112704 (Counterclockwise)
Preceding gene: 218710870
Following gene: 218710866
Centisome position: 94.37
GC content: 41.92
Gene sequence:
>699_bases ATGAAAAAAGCATTTCTTCTCGTTTCACTATTATCTACATTTCTCATTGGCTGTTCATCAACCAGCCCTCGCAAAAACCT AGAGCAATTTGAAACTCACACCGGCGGCCAAGTCATGGGCGACGCGACAAGTTTCTACTGGGTTACAAATAAGCTAACAC AACCTCATACTTCAGCTGACTACGTCACTGTAGGCGATTACGGCTGGTACCAAACCGACTATGCTTGGTCGGAAGGTATA CTTCGTGAATTTATTCGTGAAGGTGAGCAACGTAATTCTTCTAATGAGCTGGTTCCGTATAGTGTCCATGTGCGTTTTAA TAAGTCAGGCGAAGCTGTATATCAGCAGTATCGTATTGATAGCAAAATTTTACCTATCCAAGTTAAGCAACTCGAAAGCT ACCAGAAAGAAGCCAAGTCGGTTTTAGAAACTACGATGAAGCAGCATGACGAAGGGCTCAGACTGGTTCAGGGTTACTGG AATGGCAAAACGTTCCAGACTTGCTCTGGTAAGCAATTTTCTGACATTGAATTTAATCAAACACTACCTAATTTTGTGAT TAACCGTTTGTCGTCTGTAGAGAGCTATGGTGCTTTTGTCGGCAAGGAGTCTCTCAGAAAACTATCTGTTGCTGAATTTT TGATGTTGGCAGATGACAACCATCAGTGTGTTACAAGACCATCATTGTTGAAAGAATAG
Upstream 100 bases:
>100_bases CAAATGTTCCAGCATTTGTTGCAGGTAAAGCGCTGAAAGATTCAGTGAAATAATCTAAACTGTACCGAGGTAGTCGTATT CCACCTCGGTACAGGTTTTT
Downstream 100 bases:
>100_bases AGCGTATTTAAAAGGGTTCAGAGAATTTACCCGCTGTAGGTCAGTGCTTATTTGTGTGTACAGGAACAGACCCCAGAACA GATTAAGCAATAAAAAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE
Sequences:
>Translated_232_residues MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE >Mature_232_residues MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSADYVTVGDYGWYQTDYAWSEGI LREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRIDSKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYW NGKTFQTCSGKQFSDIEFNQTLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26529; Mature: 26529
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSAD CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCC YVTVGDYGWYQTDYAWSEGILREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRID EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHCC SKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYWNGKTFQTCSGKQFSDIEFNQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCEEECCCCCCCCCCCHHH TLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCHHHCC >Mature Secondary Structure MKKAFLLVSLLSTFLIGCSSTSPRKNLEQFETHTGGQVMGDATSFYWVTNKLTQPHTSAD CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCC YVTVGDYGWYQTDYAWSEGILREFIREGEQRNSSNELVPYSVHVRFNKSGEAVYQQYRID EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHCC SKILPIQVKQLESYQKEAKSVLETTMKQHDEGLRLVQGYWNGKTFQTCSGKQFSDIEFNQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHCCCCEEECCCCCCCCCCCHHH TLPNFVINRLSSVESYGAFVGKESLRKLSVAEFLMLADDNHQCVTRPSLLKE HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA