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The map label for this gene is yeaI [H]

Identifier: 218710865

GI number: 218710865

Start: 3107707

End: 3108657

Strand: Direct

Name: yeaI [H]

Synonym: VS_2949

Alternate gene names: 218710865

Gene position: 3107707-3108657 (Clockwise)

Preceding gene: 218710864

Following gene: 218710867

Centisome position: 94.19

GC content: 43.11

Gene sequence:

>951_bases
ATGCTTGATATGAAAAGGGAAGAATGGCTTAGCACACTGATCCGTGAACTGCCTGATCGTCATCTTCTGTTGGATACATC
CGGACGTATTGTTGAAAACTTTGACAATCCAAATCACCACACAGTTTCAGAACTGTTGCCTCCCTCGGTTGAAAAGCAGC
TATTAGAGGCGGCAAAGCAAGCTTATTCCAGTCGCGAAATTCAATACATTCAATACTCTCTTGCGCCCTGTCAGCAACTT
CAGCTTTCTATTGAACAACTTTTCGCTCAAGGTGAAGAATCAGACGATCGATATTTTGAATCGACATTAAAGCCATTGTA
TCTCTCGCCAGAAAAGCAATACGTGCTGTGGCAAGAGCGAGATATTACTAAAGCACAGCAACGTGAAGCTGAGCTGATAG
AACTCGCTGAAATCGATGAGCTAACTGGGATTTTAAATAGACGAGCCTTTTTACTTGGGTTGGAAAAAGAGTTCAGTCAA
CCGCCTAAGCAAAGCTTAACTTGTTTGATGATAGACATAGACCACTTCAAAGAAATCAATGATCAAGTTGGCCACCTCTC
TGGTGATGAGGTAATCGTTCAAGTCGCGAGTTTATGCCAACAGTCAATAGACTGCGATGATTATCTAGGTCGCTTGGGTG
GCGAAGAATTCGGTGTCATTCTCACACACACCAGTGCCATTGAAGCTTATTACGTTGCAGAGACGATTCGTAAAACAATT
GAATCAACACCATGCACCGTAGACGGCCACATCATCTACCCAACAGTCAGCATCGGTGTTGCTGAATACACACCACATCT
TAAAACCATAAAAGAACTATTGGCTCAAGCTGATAGAGCCATGTACTCTTCAAAGCAGACTGGCCGCAACCAAGTCACGC
TTTACCATAATAACCTACCCACTTTAAAAATTGACGCTCAACTAAGAGCCAAAATACTGCAAGCTTCCTAG

Upstream 100 bases:

>100_bases
CAACAAGCGAACAATTATCAATCAATTAATGAGATGTAACGATTGATAACGTAATCACTACCGATATAATGACCCATTAA
TCTAATCGTCTGGAAGCTAC

Downstream 100 bases:

>100_bases
GGTTATCAACCGTAGTAAACCTCTCTCCCTAACGGGGGACCTTCTCAGCTATTTACCATCAGCAGCACAGCATGAGCTTT
GTTTATCTTCGCTCGCCAAA

Product: putative sensory box/GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLDMKREEWLSTLIRELPDRHLLLDTSGRIVENFDNPNHHTVSELLPPSVEKQLLEAAKQAYSSREIQYIQYSLAPCQQL
QLSIEQLFAQGEESDDRYFESTLKPLYLSPEKQYVLWQERDITKAQQREAELIELAEIDELTGILNRRAFLLGLEKEFSQ
PPKQSLTCLMIDIDHFKEINDQVGHLSGDEVIVQVASLCQQSIDCDDYLGRLGGEEFGVILTHTSAIEAYYVAETIRKTI
ESTPCTVDGHIIYPTVSIGVAEYTPHLKTIKELLAQADRAMYSSKQTGRNQVTLYHNNLPTLKIDAQLRAKILQAS

Sequences:

>Translated_316_residues
MLDMKREEWLSTLIRELPDRHLLLDTSGRIVENFDNPNHHTVSELLPPSVEKQLLEAAKQAYSSREIQYIQYSLAPCQQL
QLSIEQLFAQGEESDDRYFESTLKPLYLSPEKQYVLWQERDITKAQQREAELIELAEIDELTGILNRRAFLLGLEKEFSQ
PPKQSLTCLMIDIDHFKEINDQVGHLSGDEVIVQVASLCQQSIDCDDYLGRLGGEEFGVILTHTSAIEAYYVAETIRKTI
ESTPCTVDGHIIYPTVSIGVAEYTPHLKTIKELLAQADRAMYSSKQTGRNQVTLYHNNLPTLKIDAQLRAKILQAS
>Mature_316_residues
MLDMKREEWLSTLIRELPDRHLLLDTSGRIVENFDNPNHHTVSELLPPSVEKQLLEAAKQAYSSREIQYIQYSLAPCQQL
QLSIEQLFAQGEESDDRYFESTLKPLYLSPEKQYVLWQERDITKAQQREAELIELAEIDELTGILNRRAFLLGLEKEFSQ
PPKQSLTCLMIDIDHFKEINDQVGHLSGDEVIVQVASLCQQSIDCDDYLGRLGGEEFGVILTHTSAIEAYYVAETIRKTI
ESTPCTVDGHIIYPTVSIGVAEYTPHLKTIKELLAQADRAMYSSKQTGRNQVTLYHNNLPTLKIDAQLRAKILQAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1788085, Length=166, Percent_Identity=36.7469879518072, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI145693134, Length=165, Percent_Identity=36.969696969697, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1787262, Length=163, Percent_Identity=38.0368098159509, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786584, Length=173, Percent_Identity=35.2601156069364, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081881, Length=288, Percent_Identity=31.25, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787802, Length=165, Percent_Identity=35.7575757575758, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788381, Length=203, Percent_Identity=29.5566502463054, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082007, Length=162, Percent_Identity=38.8888888888889, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787541, Length=284, Percent_Identity=26.4084507042254, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081977, Length=176, Percent_Identity=32.3863636363636, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787816, Length=157, Percent_Identity=33.1210191082803, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787056, Length=159, Percent_Identity=32.7044025157233, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788956, Length=172, Percent_Identity=30.8139534883721, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081974, Length=154, Percent_Identity=31.1688311688312, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 36021; Mature: 36021

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMKREEWLSTLIRELPDRHLLLDTSGRIVENFDNPNHHTVSELLPPSVEKQLLEAAKQ
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHH
AYSSREIQYIQYSLAPCQQLQLSIEQLFAQGEESDDRYFESTLKPLYLSPEKQYVLWQER
HHCCCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCEEEEECC
DITKAQQREAELIELAEIDELTGILNRRAFLLGLEKEFSQPPKQSLTCLMIDIDHFKEIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCEEEEEEHHHHHHHH
DQVGHLSGDEVIVQVASLCQQSIDCDDYLGRLGGEEFGVILTHTSAIEAYYVAETIRKTI
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHH
ESTPCTVDGHIIYPTVSIGVAEYTPHLKTIKELLAQADRAMYSSKQTGRNQVTLYHNNLP
CCCCCEECCEEEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
TLKIDAQLRAKILQAS
CEEECHHHHHHHHCCC
>Mature Secondary Structure
MLDMKREEWLSTLIRELPDRHLLLDTSGRIVENFDNPNHHTVSELLPPSVEKQLLEAAKQ
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHH
AYSSREIQYIQYSLAPCQQLQLSIEQLFAQGEESDDRYFESTLKPLYLSPEKQYVLWQER
HHCCCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCCCCEEEEECC
DITKAQQREAELIELAEIDELTGILNRRAFLLGLEKEFSQPPKQSLTCLMIDIDHFKEIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCCEEEEEEHHHHHHHH
DQVGHLSGDEVIVQVASLCQQSIDCDDYLGRLGGEEFGVILTHTSAIEAYYVAETIRKTI
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHH
ESTPCTVDGHIIYPTVSIGVAEYTPHLKTIKELLAQADRAMYSSKQTGRNQVTLYHNNLP
CCCCCEECCEEEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
TLKIDAQLRAKILQAS
CEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]