Click here to switch to the map view.

The map label for this gene is 218710825

Identifier: 218710825

GI number: 218710825

Start: 3062019

End: 3062366

Strand: Direct

Name: 218710825

Synonym: VS_2908

Alternate gene names: NA

Gene position: 3062019-3062366 (Clockwise)

Preceding gene: 218710824

Following gene: 218710828

Centisome position: 92.81

GC content: 45.98

Gene sequence:

>348_bases
ATGGCACAGCCACAGCCAAATCAAAAACTGCCCCCCTTTGATGAACTGGTCCAACTCGCCAAAAGCGATCCGAAAGCATT
CAATCAATTCAAACACGAAATGTGCGAGCAGATGATTTGTTCGGCCTCGGAAACTATGCAAGACAGGCTACGCGCTCAGC
AAAGTCACATCGATTTGGTGGTCGGTCGCTGTAAAAATCCACATCATGTTAATGTCGTGCTCATGCAGGAGCTTCGTTGT
CAGGTCTGTAAATTCCAAGATGCACTCGAAGGTCGCTGTAGTTTTGAAGAACCTAAACCTGAAAATGTCGTGCCTTTCAG
GCCAAATACAGAACCCAAAATGTACTAA

Upstream 100 bases:

>100_bases
CCGTCTCAATATTGAGAAAATGAGAATAGATTAAAATTTGTACAAATTTATTTCTTAAGCTTAAAGCATATGAAACACGC
TTAATGCTAAGGAAGGAATC

Downstream 100 bases:

>100_bases
AGTAGAAAAGTATCAAAAAGAAAAAAGGGAGCGCAATGCTCCCTTTTTACTGATGAATTATCCAATCTTTAAACTGGATC
TTCACCGTAATCATTACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAQPQPNQKLPPFDELVQLAKSDPKAFNQFKHEMCEQMICSASETMQDRLRAQQSHIDLVVGRCKNPHHVNVVLMQELRC
QVCKFQDALEGRCSFEEPKPENVVPFRPNTEPKMY

Sequences:

>Translated_115_residues
MAQPQPNQKLPPFDELVQLAKSDPKAFNQFKHEMCEQMICSASETMQDRLRAQQSHIDLVVGRCKNPHHVNVVLMQELRC
QVCKFQDALEGRCSFEEPKPENVVPFRPNTEPKMY
>Mature_114_residues
AQPQPNQKLPPFDELVQLAKSDPKAFNQFKHEMCEQMICSASETMQDRLRAQQSHIDLVVGRCKNPHHVNVVLMQELRCQ
VCKFQDALEGRCSFEEPKPENVVPFRPNTEPKMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13341; Mature: 13209

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPQPNQKLPPFDELVQLAKSDPKAFNQFKHEMCEQMICSASETMQDRLRAQQSHIDLV
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VGRCKNPHHVNVVLMQELRCQVCKFQDALEGRCSFEEPKPENVVPFRPNTEPKMY
HHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQPQPNQKLPPFDELVQLAKSDPKAFNQFKHEMCEQMICSASETMQDRLRAQQSHIDLV
CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
VGRCKNPHHVNVVLMQELRCQVCKFQDALEGRCSFEEPKPENVVPFRPNTEPKMY
HHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA