Click here to switch to the map view.

The map label for this gene is 218710775

Identifier: 218710775

GI number: 218710775

Start: 3001793

End: 3002584

Strand: Reverse

Name: 218710775

Synonym: VS_2858

Alternate gene names: NA

Gene position: 3002584-3001793 (Counterclockwise)

Preceding gene: 218710776

Following gene: 218710766

Centisome position: 91.01

GC content: 45.08

Gene sequence:

>792_bases
ATGACGCCCGATCTACTCTTTAAATCACTATGGAATGATTACATTCACAGGCTTTGCCCATCGGCTGAGAAAGTACATCA
CTTGCTGAAAGAAGACGAAGCCCTGATTAACGATCACATTGCACTGCGTACTTTCAATGTTGCACCGCTAGGTATTGAAA
CATTGGCTAAACCTTTCCTTGAGTTAGGTTACAAGGCGTGTGGCGATTACTTATTTGAGAGCAAGAAGCTAGTGGCTAAG
CATTACGAGCATCCAGATCCAAACCAACCAAAAGTGTTCATTAGTGAGTTGAAGGTCGAAGAGTGTTCAAGTGACCTGCA
ACAGATCGTTGCTAAGTTGGTTGAGCAAGTGGATGCTAGCAAACTGCAAGGTCATGAATTCTTGTTTGGTGGTCGTCTTT
GGGATTTGAGCTTCGCAGATTTCCAAGTGCTAGCAAAAGAGAGTGAGTACGCTTCTTGGCTAGCCGCTCATGGTTACGGT
GCAAACCACTTTACGGTGAGTGTGAACCAGTTAAATAAGTTCGATGAAGTGCAGGCCGTGAATGACTATCTGAATGAGTC
GGGATTCACTATCAATGTATCTGGCGGCGAGGTGAAAGGCTCTCCAGAGGTCTTATTAGAGCAATCATCAACCATGGCAG
ATAAAGTCCCAGTTTCATTTGTTGAAGGCAATGAGATGATTCCTGGCGGCTTCTATGAGTTCGCTAAGCGTTATGCGATG
GCCAATGGTGAGCTTTATACCGGATTTGTCGCGGCATCAGCTGACAAGATCTTTGAAAGCACCAACGGTTAA

Upstream 100 bases:

>100_bases
AACAAGTATGTCACAGGCTGATGGCTGCTGACTCTATGTCCAGCCTCTCCCTCTCTAATCCAAATTACTAGCTTGCTAGA
ACCTCTGACAAGGAGTCACC

Downstream 100 bases:

>100_bases
AGAAAGATACGAGCACGGGCTTTGCCCTAGAGGTGCGGGTACGCTTCGCTTCGAGATACTTTAGAATAGTGAAGTCGGAT
TTCTAACTTTGCTTCCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTPDLLFKSLWNDYIHRLCPSAEKVHHLLKEDEALINDHIALRTFNVAPLGIETLAKPFLELGYKACGDYLFESKKLVAK
HYEHPDPNQPKVFISELKVEECSSDLQQIVAKLVEQVDASKLQGHEFLFGGRLWDLSFADFQVLAKESEYASWLAAHGYG
ANHFTVSVNQLNKFDEVQAVNDYLNESGFTINVSGGEVKGSPEVLLEQSSTMADKVPVSFVEGNEMIPGGFYEFAKRYAM
ANGELYTGFVAASADKIFESTNG

Sequences:

>Translated_263_residues
MTPDLLFKSLWNDYIHRLCPSAEKVHHLLKEDEALINDHIALRTFNVAPLGIETLAKPFLELGYKACGDYLFESKKLVAK
HYEHPDPNQPKVFISELKVEECSSDLQQIVAKLVEQVDASKLQGHEFLFGGRLWDLSFADFQVLAKESEYASWLAAHGYG
ANHFTVSVNQLNKFDEVQAVNDYLNESGFTINVSGGEVKGSPEVLLEQSSTMADKVPVSFVEGNEMIPGGFYEFAKRYAM
ANGELYTGFVAASADKIFESTNG
>Mature_262_residues
TPDLLFKSLWNDYIHRLCPSAEKVHHLLKEDEALINDHIALRTFNVAPLGIETLAKPFLELGYKACGDYLFESKKLVAKH
YEHPDPNQPKVFISELKVEECSSDLQQIVAKLVEQVDASKLQGHEFLFGGRLWDLSFADFQVLAKESEYASWLAAHGYGA
NHFTVSVNQLNKFDEVQAVNDYLNESGFTINVSGGEVKGSPEVLLEQSSTMADKVPVSFVEGNEMIPGGFYEFAKRYAMA
NGELYTGFVAASADKIFESTNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29323; Mature: 29192

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLLFKSLWNDYIHRLCPSAEKVHHLLKEDEALINDHIALRTFNVAPLGIETLAKPFL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHH
ELGYKACGDYLFESKKLVAKHYEHPDPNQPKVFISELKVEECSSDLQQIVAKLVEQVDAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQGHEFLFGGRLWDLSFADFQVLAKESEYASWLAAHGYGANHFTVSVNQLNKFDEVQAV
HCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHH
NDYLNESGFTINVSGGEVKGSPEVLLEQSSTMADKVPVSFVEGNEMIPGGFYEFAKRYAM
HHHHCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHH
ANGELYTGFVAASADKIFESTNG
CCCCEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPDLLFKSLWNDYIHRLCPSAEKVHHLLKEDEALINDHIALRTFNVAPLGIETLAKPFL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHH
ELGYKACGDYLFESKKLVAKHYEHPDPNQPKVFISELKVEECSSDLQQIVAKLVEQVDAS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQGHEFLFGGRLWDLSFADFQVLAKESEYASWLAAHGYGANHFTVSVNQLNKFDEVQAV
HCCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHH
NDYLNESGFTINVSGGEVKGSPEVLLEQSSTMADKVPVSFVEGNEMIPGGFYEFAKRYAM
HHHHCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHH
ANGELYTGFVAASADKIFESTNG
CCCCEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA