| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is tusC [H]
Identifier: 218710756
GI number: 218710756
Start: 2985753
End: 2986109
Strand: Reverse
Name: tusC [H]
Synonym: VS_2839
Alternate gene names: 218710756
Gene position: 2986109-2985753 (Counterclockwise)
Preceding gene: 218710757
Following gene: 218710755
Centisome position: 90.51
GC content: 43.7
Gene sequence:
>357_bases TTGAGCACATTAGCATTTATATTTAACAGCTTTCCTCATACAACGGCTGCAGGTAGGGAAGGACTAGACGCATTGTTAGC GGCTTCAGTTTACAGTGAAGACATCAGCGCATTCTTTGTCGGTGATGGCGTTACACAGCTTCTCAAAGCGCAACAGCCTG ATGAATCCTTATCACGTGACTATATTTCTGCATTCAAGCTTATGGACCTCTACGACATCGAGCAGGTTTACGTGTGTCAA CATAGCCTCAATCAGTTTGGTCTCTCGACTGATAACTTACTGATCGATGTGACTGCGCTAGAAGTGAATGAGTTGACGCA GAAGTTAGCTCAGAGCAAAAAAATACTGACTTTCTAG
Upstream 100 bases:
>100_bases AACATCAATTAAGTGCCTCTAACTTGGCGACAGGGTTTACCCAAGCTGGCTTAGGGAGTTTATCTGAAGCACTTTTGACG CAAGATAGGGTTGTCCAGTT
Downstream 100 bases:
>100_bases GGAACGTTATGCTTCATATTGTAAAATCAGTAGACAAACTCAAGCTTGCATTGATGTACTCGCAACAAAAGGACCATATC CTTTTGGTTGAAGATGCGGT
Product: DsrF protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSTLAFIFNSFPHTTAAGREGLDALLAASVYSEDISAFFVGDGVTQLLKAQQPDESLSRDYISAFKLMDLYDIEQVYVCQ HSLNQFGLSTDNLLIDVTALEVNELTQKLAQSKKILTF
Sequences:
>Translated_118_residues MSTLAFIFNSFPHTTAAGREGLDALLAASVYSEDISAFFVGDGVTQLLKAQQPDESLSRDYISAFKLMDLYDIEQVYVCQ HSLNQFGLSTDNLLIDVTALEVNELTQKLAQSKKILTF >Mature_117_residues STLAFIFNSFPHTTAAGREGLDALLAASVYSEDISAFFVGDGVTQLLKAQQPDESLSRDYISAFKLMDLYDIEQVYVCQH SLNQFGLSTDNLLIDVTALEVNELTQKLAQSKKILTF
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG2923
COG function: function code P; Uncharacterized protein involved in the oxidation of intracellular sulfur
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrF/tusC family [H]
Homologues:
Organism=Escherichia coli, GI1789742, Length=119, Percent_Identity=51.2605042016807, Blast_Score=127, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017462 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 13058; Mature: 12927
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLAFIFNSFPHTTAAGREGLDALLAASVYSEDISAFFVGDGVTQLLKAQQPDESLSRD CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCCHHHHHHCCCCCHHHHHH YISAFKLMDLYDIEQVYVCQHSLNQFGLSTDNLLIDVTALEVNELTQKLAQSKKILTF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STLAFIFNSFPHTTAAGREGLDALLAASVYSEDISAFFVGDGVTQLLKAQQPDESLSRD CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHEEEECCCHHHHHHCCCCCHHHHHH YISAFKLMDLYDIEQVYVCQHSLNQFGLSTDNLLIDVTALEVNELTQKLAQSKKILTF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA