| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fusA1 [H]
Identifier: 218710752
GI number: 218710752
Start: 2982075
End: 2984171
Strand: Reverse
Name: fusA1 [H]
Synonym: VS_2835
Alternate gene names: 218710752
Gene position: 2984171-2982075 (Counterclockwise)
Preceding gene: 218710753
Following gene: 218710751
Centisome position: 90.45
GC content: 44.64
Gene sequence:
>2097_bases GTGGCTCGTAAAACTCCTATTGAGCAATACCGTAATATCGGTATCGTTGCTCACGTAGATGCAGGTAAAACAACCACAAG TGAACGTATTCTGTTCTATACCGGTCTTTCTCACAAAATCGGCGAAGTTCACGATGGTGCAGCAACCATGGATTGGATGG AGCAAGAGCAAGAGCGCGGTATTACGATCACTTCAGCAGCAACTACTACGTTTTGGCGTGGTATGGAAGCTCAGTACTCT GACCACCGTATTAATATCATCGACACTCCGGGGCACGTTGACTTCACAATCGAAGTAGAACGTTCTCTGCGTGTGCTTGA TGGTGCAGTTGTTGTGTTCTGTGGCTCATCTGGTGTTGAACCTCAGTCAGAGACTGTATGGCGTCAAGCTGATAAGTACC AAGTTCCACGTATGGTTTTCGTTAATAAAATGGACCGTACAGGCGCAGACTTCTTGCGTGTAGTTGAACAGATCAAGGAT CGCCTAGGCGCAACTCCTGTTCCAATTCAACTGAACATTGGTGCTGAAGAAAACTTCCAAGGCGTTGTCGATCTTATCAA GATGAAGGCGATTAACTGGAATGAAGCTGACCAAGGCATGACTTTCACGTACGAAGATATTCCTGCAGACATGCAAGAAA TGGCTGAAGAATATCGTACAGAACTTGTTGAAGCTGCTGCAGAAGCAAATGAAGAGCTGATGGATAAGTACCTTGAAGAA GGTGAACTAACAGAAGCTGAAATCAAACAAGGTCTTCGTACTCGTACCCTTAATAATGAAATCGTACTTGCTACATGTGG TAGTGCATTCAAAAACAAAGGTGTACAAGCTGTTCTAGATGCAGTTGTTGACTTCCTTCCTTCTCCAGTCGATGTACCTG CAATTAAAGGTATCGATGAAGACGAGAACGAAGCAGAGCGTCATGCAGACGACAAAGAACCGTTCTCAGCGCTAGCATTT AAAATTGCAACAGACCCATTTGTTGGTACTTTAACTTTCATCCGTGTTTACTCTGGTGTTGTTGAAAGCGGTAAAACAGC TTACAACTCTGTGAAGAAACAACGTGAACGTTTAGGGCGCATTGTTCAAATGCACTCAAACAAGCGTGAAGAAGTAAAAG AAGTACGAGCAGGTGACATCGCAGCCATTATCGGCCTTAAAGATGTTACTACTGGTGAAACTCTATGTGATCAGAACCAT AAAATTGTTCTTGAACGTATGGAATTCCCAGATCCAGTTATTCAGATCGTTGTAGAGCCTCGCTCTCAAGCTGATCAAGA TAAAATGACTATCGCGTTAGGTAAGCTAGCGGCAGAAGATCCATCGTTCCGTGTTGAAACGGATGACGAGACTGGCCAGA CACTAATCTCTGGTATGGGTGAACTGCACTTAGATATCATCGTTGACCGCATGAAGCGTGAATTCAGTGTGAACTGCAAC GTTGGTAATCCGCAAGTTGCTTATCGTGAAACCATTCGTGGTACAGCGAAAGCTGAAGGTAAATTTATCCGCGAACATGG TGGTAAAGGACAGTACGGTCACGTGTGGCTGAAACTGGAACCATCAGAAGCCGGTGAAGGCTTTGTCTTCGTAGATGAAA TTGCCAATGGTATCGTGCCAAAAGAGTTCATTACCTCTGTCGCTAAAGGCGTTGAAGAGCAAATGAACAATGGTGTATTA GCGGGCTATCCAGTTTTGGATATCAAAGCTACACTATATGATGGTTCTTACCATGAAGTAGATTCAAGTGAGATGGCGTT TACAATCGCTGCCTCTATGGCTTTCAGAACAGGTGCACTAGAAGCGCAACCAGTTTTGCTTGAGCCTATGATGAAAGTTG AAGTAACTACTCCAGAAGACTGGATGGGTGACGTTGTTGGCGATATTAACCGTCGTCGCGGCATCATCGAAGGTATGGAC GAGGGGACAGCTGGCCTGAAGATAATTCGTGCACAAGTTCCGTTGTCTGTCATGTTCGGTTACGCAACTGATTTACGTTC TGCGACACAAGGTCGTGCTTCTTACTCTATGGAGTTTAGTGAGTACGCTGAAGTGCCAAAAAATGTTGCTAATGCAATCA TTGCAGAGCGTGGTTAA
Upstream 100 bases:
>100_bases TTGCTATTTCTAGGGCAAGCACTTTTTAGCGAAGTATCGCTTTTAACGCATAATCTAGACATAGCAATAGTCCCTAAGTC TCTAATAAGAGGATTCAACC
Downstream 100 bases:
>100_bases ACAAAAGGGACGCATTTTTTTCATTTTTTGAAAGAACAATGCGTCCAAATATTGCGCTAACGAGAGTTGGCGCATAAAAT AGCAATTTCTGGCGCGTCTC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MARKTPIEQYRNIGIVAHVDAGKTTTSERILFYTGLSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWRGMEAQYS DHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYQVPRMVFVNKMDRTGADFLRVVEQIKD RLGATPVPIQLNIGAEENFQGVVDLIKMKAINWNEADQGMTFTYEDIPADMQEMAEEYRTELVEAAAEANEELMDKYLEE GELTEAEIKQGLRTRTLNNEIVLATCGSAFKNKGVQAVLDAVVDFLPSPVDVPAIKGIDEDENEAERHADDKEPFSALAF KIATDPFVGTLTFIRVYSGVVESGKTAYNSVKKQRERLGRIVQMHSNKREEVKEVRAGDIAAIIGLKDVTTGETLCDQNH KIVLERMEFPDPVIQIVVEPRSQADQDKMTIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVNCN VGNPQVAYRETIRGTAKAEGKFIREHGGKGQYGHVWLKLEPSEAGEGFVFVDEIANGIVPKEFITSVAKGVEEQMNNGVL AGYPVLDIKATLYDGSYHEVDSSEMAFTIAASMAFRTGALEAQPVLLEPMMKVEVTTPEDWMGDVVGDINRRRGIIEGMD EGTAGLKIIRAQVPLSVMFGYATDLRSATQGRASYSMEFSEYAEVPKNVANAIIAERG
Sequences:
>Translated_698_residues MARKTPIEQYRNIGIVAHVDAGKTTTSERILFYTGLSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWRGMEAQYS DHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYQVPRMVFVNKMDRTGADFLRVVEQIKD RLGATPVPIQLNIGAEENFQGVVDLIKMKAINWNEADQGMTFTYEDIPADMQEMAEEYRTELVEAAAEANEELMDKYLEE GELTEAEIKQGLRTRTLNNEIVLATCGSAFKNKGVQAVLDAVVDFLPSPVDVPAIKGIDEDENEAERHADDKEPFSALAF KIATDPFVGTLTFIRVYSGVVESGKTAYNSVKKQRERLGRIVQMHSNKREEVKEVRAGDIAAIIGLKDVTTGETLCDQNH KIVLERMEFPDPVIQIVVEPRSQADQDKMTIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVNCN VGNPQVAYRETIRGTAKAEGKFIREHGGKGQYGHVWLKLEPSEAGEGFVFVDEIANGIVPKEFITSVAKGVEEQMNNGVL AGYPVLDIKATLYDGSYHEVDSSEMAFTIAASMAFRTGALEAQPVLLEPMMKVEVTTPEDWMGDVVGDINRRRGIIEGMD EGTAGLKIIRAQVPLSVMFGYATDLRSATQGRASYSMEFSEYAEVPKNVANAIIAERG >Mature_697_residues ARKTPIEQYRNIGIVAHVDAGKTTTSERILFYTGLSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWRGMEAQYSD HRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYQVPRMVFVNKMDRTGADFLRVVEQIKDR LGATPVPIQLNIGAEENFQGVVDLIKMKAINWNEADQGMTFTYEDIPADMQEMAEEYRTELVEAAAEANEELMDKYLEEG ELTEAEIKQGLRTRTLNNEIVLATCGSAFKNKGVQAVLDAVVDFLPSPVDVPAIKGIDEDENEAERHADDKEPFSALAFK IATDPFVGTLTFIRVYSGVVESGKTAYNSVKKQRERLGRIVQMHSNKREEVKEVRAGDIAAIIGLKDVTTGETLCDQNHK IVLERMEFPDPVIQIVVEPRSQADQDKMTIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVNCNV GNPQVAYRETIRGTAKAEGKFIREHGGKGQYGHVWLKLEPSEAGEGFVFVDEIANGIVPKEFITSVAKGVEEQMNNGVLA GYPVLDIKATLYDGSYHEVDSSEMAFTIAASMAFRTGALEAQPVLLEPMMKVEVTTPEDWMGDVVGDINRRRGIIEGMDE GTAGLKIIRAQVPLSVMFGYATDLRSATQGRASYSMEFSEYAEVPKNVANAIIAERG
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=690, Percent_Identity=42.463768115942, Blast_Score=551, Evalue=1e-156, Organism=Homo sapiens, GI19923640, Length=733, Percent_Identity=37.7899045020464, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI25306287, Length=733, Percent_Identity=36.0163710777626, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI25306283, Length=456, Percent_Identity=41.2280701754386, Blast_Score=314, Evalue=2e-85, Organism=Homo sapiens, GI4503483, Length=483, Percent_Identity=24.6376811594203, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI157426893, Length=202, Percent_Identity=31.1881188118812, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=39.1304347826087, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=39.1666666666667, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=39.1666666666667, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=39.1666666666667, Blast_Score=81, Evalue=4e-15, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=70.5965909090909, Blast_Score=1030, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=517, Percent_Identity=25.9187620889749, Blast_Score=140, Evalue=3e-34, Organism=Escherichia coli, GI48994988, Length=154, Percent_Identity=40.9090909090909, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788922, Length=158, Percent_Identity=38.6075949367089, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17533571, Length=703, Percent_Identity=39.6870554765292, Blast_Score=496, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17556745, Length=730, Percent_Identity=29.041095890411, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17506493, Length=815, Percent_Identity=26.6257668711656, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17557151, Length=163, Percent_Identity=37.4233128834356, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=698, Percent_Identity=41.8338108882521, Blast_Score=548, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322359, Length=804, Percent_Identity=30.9701492537313, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6324707, Length=810, Percent_Identity=25.5555555555556, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320593, Length=810, Percent_Identity=25.5555555555556, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6323320, Length=159, Percent_Identity=35.2201257861635, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=174, Percent_Identity=35.0574712643678, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24582462, Length=705, Percent_Identity=42.8368794326241, Blast_Score=568, Evalue=1e-162, Organism=Drosophila melanogaster, GI221458488, Length=727, Percent_Identity=32.5997248968363, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24585709, Length=805, Percent_Identity=25.9627329192547, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24585711, Length=805, Percent_Identity=25.9627329192547, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24585713, Length=805, Percent_Identity=25.9627329192547, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI78706572, Length=202, Percent_Identity=32.1782178217822, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI28574573, Length=194, Percent_Identity=33.5051546391753, Blast_Score=96, Evalue=1e-19, Organism=Drosophila melanogaster, GI21357743, Length=136, Percent_Identity=30.8823529411765, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77287; Mature: 77156
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIEQYRNIGIVAHVDAGKTTTSERILFYTGLSHKIGEVHDGAATMDWMEQEQERG CCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTTFWRGMEAQYSDHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVE EEEEECHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCEEEEEECCCCCC PQSETVWRQADKYQVPRMVFVNKMDRTGADFLRVVEQIKDRLGATPVPIQLNIGAEENFQ CCHHHHHHHHHHCCCCCEEEHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH GVVDLIKMKAINWNEADQGMTFTYEDIPADMQEMAEEYRTELVEAAAEANEELMDKYLEE HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GELTEAEIKQGLRTRTLNNEIVLATCGSAFKNKGVQAVLDAVVDFLPSPVDVPAIKGIDE CCCCHHHHHCCHHHEECCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC DENEAERHADDKEPFSALAFKIATDPFVGTLTFIRVYSGVVESGKTAYNSVKKQRERLGR CCHHHHHCCCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IVQMHSNKREEVKEVRAGDIAAIIGLKDVTTGETLCDQNHKIVLERMEFPDPVIQIVVEP HHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCEEEEEECC RSQADQDKMTIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVNCN CCCCCCHHHEEEEHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHEEEECC VGNPQVAYRETIRGTAKAEGKFIREHGGKGQYGHVWLKLEPSEAGEGFVFVDEIANGIVP CCCCCHHHHHHHCCCHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHCCCCC KEFITSVAKGVEEQMNNGVLAGYPVLDIKATLYDGSYHEVDSSEMAFTIAASMAFRTGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCC EAQPVLLEPMMKVEVTTPEDWMGDVVGDINRRRGIIEGMDEGTAGLKIIRAQVPLSVMFG CCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATDLRSATQGRASYSMEFSEYAEVPKNVANAIIAERG HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARKTPIEQYRNIGIVAHVDAGKTTTSERILFYTGLSHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTTFWRGMEAQYSDHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVE EEEEECHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHCCCEEEEEECCCCCC PQSETVWRQADKYQVPRMVFVNKMDRTGADFLRVVEQIKDRLGATPVPIQLNIGAEENFQ CCHHHHHHHHHHCCCCCEEEHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH GVVDLIKMKAINWNEADQGMTFTYEDIPADMQEMAEEYRTELVEAAAEANEELMDKYLEE HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GELTEAEIKQGLRTRTLNNEIVLATCGSAFKNKGVQAVLDAVVDFLPSPVDVPAIKGIDE CCCCHHHHHCCHHHEECCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC DENEAERHADDKEPFSALAFKIATDPFVGTLTFIRVYSGVVESGKTAYNSVKKQRERLGR CCHHHHHCCCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IVQMHSNKREEVKEVRAGDIAAIIGLKDVTTGETLCDQNHKIVLERMEFPDPVIQIVVEP HHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCEEEEEECC RSQADQDKMTIALGKLAAEDPSFRVETDDETGQTLISGMGELHLDIIVDRMKREFSVNCN CCCCCCHHHEEEEHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHEEEECC VGNPQVAYRETIRGTAKAEGKFIREHGGKGQYGHVWLKLEPSEAGEGFVFVDEIANGIVP CCCCCHHHHHHHCCCHHHCCHHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHCCCCC KEFITSVAKGVEEQMNNGVLAGYPVLDIKATLYDGSYHEVDSSEMAFTIAASMAFRTGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCC EAQPVLLEPMMKVEVTTPEDWMGDVVGDINRRRGIIEGMDEGTAGLKIIRAQVPLSVMFG CCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATDLRSATQGRASYSMEFSEYAEVPKNVANAIIAERG HHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]