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The map label for this gene is yrbA [H]

Identifier: 218710665

GI number: 218710665

Start: 2913053

End: 2913307

Strand: Reverse

Name: yrbA [H]

Synonym: VS_2745

Alternate gene names: 218710665

Gene position: 2913307-2913053 (Counterclockwise)

Preceding gene: 218710666

Following gene: 218710664

Centisome position: 88.3

GC content: 42.35

Gene sequence:

>255_bases
GTGGACAGCACAAAAGTACAAGAATTATTAGCAGAGGCTCTGAACCTTCAGGAAATTATCGTGAAGGGTGAAGGCAGTCA
TTACGAAGTTGTTGCGGTTGATCCATGTTTTGACGGCATGAATCGAGTTAAGAAGCAGCAACTAATCTACGGCCCACTAA
TGGAATACATTCAACGCAATGATATCCATGCTCTTTCTATTAAGGCTTTCACGCCGGAAGAGTGGGAACGTGATAAGAAA
CTGATGTCACTTTAA

Upstream 100 bases:

>100_bases
ATGCTCAGTTTCGTGCCAGAACAATTACGAACGTTGTTCCAATTGAGCAATATCCAGCCAATGATGGCAGAACACATAAA
AAATTAGGCAGGAGCTATTT

Downstream 100 bases:

>100_bases
GGTTTATGATGGAAAAGTTTCGAGTTATTGGATCGGATAAGCCGCTAAGCGGTGAAGTGACGATCTCAGGCGCAAAAAAT
GCAGCCCTACCAATCCTATT

Product: putative BolA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MDSTKVQELLAEALNLQEIIVKGEGSHYEVVAVDPCFDGMNRVKKQQLIYGPLMEYIQRNDIHALSIKAFTPEEWERDKK
LMSL

Sequences:

>Translated_84_residues
MDSTKVQELLAEALNLQEIIVKGEGSHYEVVAVDPCFDGMNRVKKQQLIYGPLMEYIQRNDIHALSIKAFTPEEWERDKK
LMSL
>Mature_84_residues
MDSTKVQELLAEALNLQEIIVKGEGSHYEVVAVDPCFDGMNRVKKQQLIYGPLMEYIQRNDIHALSIKAFTPEEWERDKK
LMSL

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=81, Percent_Identity=61.7283950617284, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9694; Mature: 9694

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTKVQELLAEALNLQEIIVKGEGSHYEVVAVDPCFDGMNRVKKQQLIYGPLMEYIQRN
CCHHHHHHHHHHHHCHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
DIHALSIKAFTPEEWERDKKLMSL
CCCEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDSTKVQELLAEALNLQEIIVKGEGSHYEVVAVDPCFDGMNRVKKQQLIYGPLMEYIQRN
CCHHHHHHHHHHHHCHHHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
DIHALSIKAFTPEEWERDKKLMSL
CCCEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]