| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is acpS
Identifier: 218710565
GI number: 218710565
Start: 2805697
End: 2806077
Strand: Reverse
Name: acpS
Synonym: VS_2615
Alternate gene names: 218710565
Gene position: 2806077-2805697 (Counterclockwise)
Preceding gene: 218710566
Following gene: 218710562
Centisome position: 85.05
GC content: 46.72
Gene sequence:
>381_bases ATGGCTGTTGTTGGATTAGGTACAGATATCGCAGAAATTGAACGTGTTGAAAAGGCATTATCACGAAGTGGTGAGGCTTT CGCTCAGCGTATTTTGACCGATTCTGAATTTGAAGTATTCCAGCAACTTAAGCAAAAAGGGCGTTACCTTGCAAAGCGTT TTGCTGCAAAAGAGGCGGCGTCTAAGGCATTAGGCACAGGCATCGCTCTTGGTGTGACCTTCCACGATTTCGAGATTTCA AACGATGAGCATGGCAAGCCAGTTCTAAGCCTGCATAAAAAAGCGCGTGAAATCGCAGATGCGAGTGGTACAAAGTCGAT TCACCTGACTATCTCTGATGAGCGCCATTATGCGGTGGCGACGGTACTACTCGAGTCGTAA
Upstream 100 bases:
>100_bases CGCTTAGTTCTTTAACTCGGCATTCGTTTAGTTGTAAGCGTTAAGCGGTTAATCAGTAGAATCGAAAAGTTAATAGATAG AAGTTGGTAGTAGGGTAAAC
Downstream 100 bases:
>100_bases ATAGATTACCGCTACTCTATATCTAGCACCCTAGGTTCTAGACAGAAAAAAAGCAGAGCTAATGAGCTCTGCTTTTTTAT TGGCTGGTAAACCGTTTAAT
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAVVGLGTDIAEIERVEKALSRSGEAFAQRILTDSEFEVFQQLKQKGRYLAKRFAAKEAASKALGTGIALGVTFHDFEIS NDEHGKPVLSLHKKAREIADASGTKSIHLTISDERHYAVATVLLES
Sequences:
>Translated_126_residues MAVVGLGTDIAEIERVEKALSRSGEAFAQRILTDSEFEVFQQLKQKGRYLAKRFAAKEAASKALGTGIALGVTFHDFEIS NDEHGKPVLSLHKKAREIADASGTKSIHLTISDERHYAVATVLLES >Mature_125_residues AVVGLGTDIAEIERVEKALSRSGEAFAQRILTDSEFEVFQQLKQKGRYLAKRFAAKEAASKALGTGIALGVTFHDFEISN DEHGKPVLSLHKKAREIADASGTKSIHLTISDERHYAVATVLLES
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=126, Percent_Identity=52.3809523809524, Blast_Score=143, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_VIBSL (B7VK75)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002418186.1 - ProteinModelPortal: B7VK75 - SMR: B7VK75 - GeneID: 7162134 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2615 - HOGENOM: HBG734479 - OMA: VHVSITH - ProtClustDB: PRK00070 - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 13740; Mature: 13609
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVGLGTDIAEIERVEKALSRSGEAFAQRILTDSEFEVFQQLKQKGRYLAKRFAAKEAA CEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKALGTGIALGVTFHDFEISNDEHGKPVLSLHKKAREIADASGTKSIHLTISDERHYAVA HHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEH TVLLES EEEECC >Mature Secondary Structure AVVGLGTDIAEIERVEKALSRSGEAFAQRILTDSEFEVFQQLKQKGRYLAKRFAAKEAA EEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SKALGTGIALGVTFHDFEISNDEHGKPVLSLHKKAREIADASGTKSIHLTISDERHYAVA HHHHCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEH TVLLES EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA