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The map label for this gene is recA [H]

Identifier: 218710547

GI number: 218710547

Start: 2783707

End: 2784759

Strand: Reverse

Name: recA [H]

Synonym: VS_2596

Alternate gene names: 218710547

Gene position: 2784759-2783707 (Counterclockwise)

Preceding gene: 218710548

Following gene: 218710540

Centisome position: 84.4

GC content: 45.11

Gene sequence:

>1053_bases
GTGGAGATAGTAATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGG
TTCAATCATGCGTCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCAC
TAGGTGCTGGTGGCCTACCGATGGGACGTATCGTAGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTT
GAGCTTATCGCAGCAGCACAGAAAGTGGGCAAAACGTGTGCATTCGTCGATGCCGAGCACGCACTAGACCCTATCTACGC
TCAAAAGTTGGGTGTTGATATCGATGCACTTCTTGTTTCTCAACCAGATACGGGTGAGCAAGCGCTTGAAATCTGTGATG
CACTGGCTCGTTCAGGTGCTATCGACGTTCTTGTTATTGACTCAGTAGCAGCACTAACACCTAAAGCAGAAATCGAAGGC
GAAATGGGCGACAGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTGACTGGTAACCTCAAGCA
GTCTAACTGTATGGCCATCTTCATTAACCAAATTCGTATGAAAATTGGTGTGATGTTTGGTAACCCTGAAACAACAACAG
GTGGTAACGCACTTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGCGCGATTAAAGATGGTGATGAAGTT
GTTGGTAACGAAACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTA
CGGCAAGGGCTTCAACCGCGAAGGTGAGCTTATCGACTTAGGTGTTAAGAATAAGCTAGTAGAAAAAGCAGGCGCTTGGT
ACAGCTACAAAGGCGACAAGATCGGCCAAGGTAAAGCAAACGCTGGTAAATACCTGCGTGAAAACCCAGAAGTAGCTCTA
GAAATTGATACTAAACTTCGTGAGTTACTGCTAACTCCTGCTGTGCTTGAAGAGAAAGGTGCAGAGAAGGAAGAAGAAAA
CGAAGAGCTATAA

Upstream 100 bases:

>100_bases
TATAGACACTGTATGAATCAACAGTATAATAAAAGCCAATTAGTCACCCCTATGTGGGTTAGAAATAGATTCTAGATCGC
TTGTTAAGACAACCGATTAT

Downstream 100 bases:

>100_bases
GCTAACGTTTTGTTAAGTCATCTTCATAAGAATGCATGACTTTGAAAGATTTTAAAGCCTCGAATTTTCGAGGCTTTATT
GTTTTAGTCGTAAAAATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MEIVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTL
ELIAAAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEG
EMGDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
VGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVAL
EIDTKLRELLLTPAVLEEKGAEKEEENEEL

Sequences:

>Translated_350_residues
MEIVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTL
ELIAAAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEG
EMGDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
VGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVAL
EIDTKLRELLLTPAVLEEKGAEKEEENEEL
>Mature_350_residues
MEIVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTL
ELIAAAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEG
EMGDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
VGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVAL
EIDTKLRELLLTPAVLEEKGAEKEEENEEL

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=330, Percent_Identity=84.2424242424242, Blast_Score=578, Evalue=1e-166,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37730; Mature: 37730

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLP
CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCC
MGRIVEVYGPESSGKTTLTLELIAAAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHHCCCEEEEEEC
QPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRK
CCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH
LTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
HHCCCCCCCCCEEHHHHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHH
VGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDK
CCCCCEEEEEHHHHCCCHHHCCEEEEECCCCCCCCCEEEECHHHHHHHHHCCEEEECCCC
IGQGKANAGKYLRENPEVALEIDTKLRELLLTPAVLEEKGAEKEEENEEL
CCCCCCCCCHHHHCCCCEEEEECHHHHHHHHCHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MEIVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLP
CCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCC
MGRIVEVYGPESSGKTTLTLELIAAAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHHCCEEEEEEHHHHCCHHHHHHHCCCEEEEEEC
QPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRK
CCCCHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHH
LTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
HHCCCCCCCCCEEHHHHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHH
VGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDK
CCCCCEEEEEHHHHCCCHHHCCEEEEECCCCCCCCCEEEECHHHHHHHHHCCEEEECCCC
IGQGKANAGKYLRENPEVALEIDTKLRELLLTPAVLEEKGAEKEEENEEL
CCCCCCCCCHHHHCCCCEEEEECHHHHHHHHCHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809840; 1544576 [H]