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The map label for this gene is yqaA [H]

Identifier: 218710527

GI number: 218710527

Start: 2757725

End: 2758186

Strand: Reverse

Name: yqaA [H]

Synonym: VS_2566

Alternate gene names: 218710527

Gene position: 2758186-2757725 (Counterclockwise)

Preceding gene: 218710528

Following gene: 218710526

Centisome position: 83.6

GC content: 45.24

Gene sequence:

>462_bases
GTGCTAGAGTTCTTTAATTCTCTTTTTGAAAACATAGCGTTGTGGTTTTCTGACTCGGCGCTGTGGGTGCTCTTCATTAG
TGGCTTCTTGAGTGCCACATTGTTACCAGGGGGCTCAGAAGCAAGCCTTGTGGCAGCATTGAGCTTAGATCAGTTCTCAA
CATCATCAATCATTCTTCTGGCGACACTCGGTAATACTTTAGGCGGGCTGACCAATTATTGGATTGGTTTGTGGCTGCCT
AATCGAACTCAATCTGAAAAGCATGGTCATAAGGCTATGGCTTGGCTGAGCCGCTATGGCTATTGGACACTGTTATTCAG
TTGGTTGCCGATCATTGGTGACCCTTTGTGCTTAGCCGCGGGTTGGTTAAGAATGAAATTTATTCCTAGCGTTATTTTGA
TAGCGATTGGCAAAGCCGCTCGCTACAGCTTACTTGCTGCTATCTACTTCGGTTTTTTCTAA

Upstream 100 bases:

>100_bases
TATCTATCAGTTAGATGAAGCACAGTCGGCGCACCTACAAGTCGAAACCGGACACACCAGAGGCAAGGTACTACTTAAAA
TGCAAGAAGGTTGATATGCA

Downstream 100 bases:

>100_bases
GGAGAACCTATGAAAAAGGTTTTACTTGGTACATTTTCTCTTATCGCCATTGCAGGCTGTTCTTACAATGTACCTAGCTC
AACACCCTTCTTTTCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLEFFNSLFENIALWFSDSALWVLFISGFLSATLLPGGSEASLVAALSLDQFSTSSIILLATLGNTLGGLTNYWIGLWLP
NRTQSEKHGHKAMAWLSRYGYWTLLFSWLPIIGDPLCLAAGWLRMKFIPSVILIAIGKAARYSLLAAIYFGFF

Sequences:

>Translated_153_residues
MLEFFNSLFENIALWFSDSALWVLFISGFLSATLLPGGSEASLVAALSLDQFSTSSIILLATLGNTLGGLTNYWIGLWLP
NRTQSEKHGHKAMAWLSRYGYWTLLFSWLPIIGDPLCLAAGWLRMKFIPSVILIAIGKAARYSLLAAIYFGFF
>Mature_153_residues
MLEFFNSLFENIALWFSDSALWVLFISGFLSATLLPGGSEASLVAALSLDQFSTSSIILLATLGNTLGGLTNYWIGLWLP
NRTQSEKHGHKAMAWLSRYGYWTLLFSWLPIIGDPLCLAAGWLRMKFIPSVILIAIGKAARYSLLAAIYFGFF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=128, Percent_Identity=49.21875, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16976; Mature: 16976

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEFFNSLFENIALWFSDSALWVLFISGFLSATLLPGGSEASLVAALSLDQFSTSSIILL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEE
ATLGNTLGGLTNYWIGLWLPNRTQSEKHGHKAMAWLSRYGYWTLLFSWLPIIGDPLCLAA
EEHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GWLRMKFIPSVILIAIGKAARYSLLAAIYFGFF
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEFFNSLFENIALWFSDSALWVLFISGFLSATLLPGGSEASLVAALSLDQFSTSSIILL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEE
ATLGNTLGGLTNYWIGLWLPNRTQSEKHGHKAMAWLSRYGYWTLLFSWLPIIGDPLCLAA
EEHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GWLRMKFIPSVILIAIGKAARYSLLAAIYFGFF
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]