| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is can [H]
Identifier: 218710498
GI number: 218710498
Start: 2727612
End: 2728271
Strand: Direct
Name: can [H]
Synonym: VS_2537
Alternate gene names: 218710498
Gene position: 2727612-2728271 (Clockwise)
Preceding gene: 218710494
Following gene: 218710500
Centisome position: 82.67
GC content: 43.64
Gene sequence:
>660_bases ATGCCAGAGATTAAACAGCTTTTTGAAAACAACTCTAAATGGTCAGAAGAAATTCGCTCTCAACGACCAGAGTATTTTAC AACGCTTGAAGAGGGTCAAAGCCCTGGTTTTCTATGGATAGGCTGCTCAGATAGCCGCGTTCCAGCCGAGCGTCTCACTG GTTTGTATTCTGGCGAACTGTTTGTTCACCGAAATGTCGCTAATCAAGTAGTTCATACCGACCTAAACTGCTTATCAGTA GTGCAATACGCTGTCGATGTACTCAAAGTGAAACACGTTATTGTTTGTGGTCACTACGGCTGTGGCGGTGTTAACGCAGC GATTGATAACCCTAAACTGGGTCTTATCAACAACTGGCTACTCCACATACGCGATAACTATCTTAAGTACCGTAAGCAAA TTGAATCTCTGCCTCGTGAACAATGGGGTGACAAGTTATGCGAAATTAACGTTGCAGAACAAGTCTACAATCTTGGTAAC TCGACCATCATGCAAAGCGCATGGGAACGTGGACAAGATATTGAAATCCACGGTGTGGTTTATGGTATTGGTAATGGCAA ACTGCAAGATCTTGGTGTTCGTTGCTCAAGTAATGACACCTTAGAAAACAGCCACTTAGCGGCGCTTGATAAAATCCTAT CGTCTCCAATCCTAGGTTAA
Upstream 100 bases:
>100_bases GTACACGTCAGATGAGTACTATTTGACACAGTTTTTACAAGATTGAATTTGTAACATTGTGTATAGTTAGAGTTCTTAAT TAAGGGATGTAAGACGCAAA
Downstream 100 bases:
>100_bases TTCTTAACGTCTAACCAATAGATATAAGAAAGAATAGATATAAAAAAGGCTCGCGTTTTGCGAGCCTTTTTTGTTTGTGT TCAACAGAGTCGTTATTACT
Product: carbonic anhydrase 2
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPEIKQLFENNSKWSEEIRSQRPEYFTTLEEGQSPGFLWIGCSDSRVPAERLTGLYSGELFVHRNVANQVVHTDLNCLSV VQYAVDVLKVKHVIVCGHYGCGGVNAAIDNPKLGLINNWLLHIRDNYLKYRKQIESLPREQWGDKLCEINVAEQVYNLGN STIMQSAWERGQDIEIHGVVYGIGNGKLQDLGVRCSSNDTLENSHLAALDKILSSPILG
Sequences:
>Translated_219_residues MPEIKQLFENNSKWSEEIRSQRPEYFTTLEEGQSPGFLWIGCSDSRVPAERLTGLYSGELFVHRNVANQVVHTDLNCLSV VQYAVDVLKVKHVIVCGHYGCGGVNAAIDNPKLGLINNWLLHIRDNYLKYRKQIESLPREQWGDKLCEINVAEQVYNLGN STIMQSAWERGQDIEIHGVVYGIGNGKLQDLGVRCSSNDTLENSHLAALDKILSSPILG >Mature_218_residues PEIKQLFENNSKWSEEIRSQRPEYFTTLEEGQSPGFLWIGCSDSRVPAERLTGLYSGELFVHRNVANQVVHTDLNCLSVV QYAVDVLKVKHVIVCGHYGCGGVNAAIDNPKLGLINNWLLHIRDNYLKYRKQIESLPREQWGDKLCEINVAEQVYNLGNS TIMQSAWERGQDIEIHGVVYGIGNGKLQDLGVRCSSNDTLENSHLAALDKILSSPILG
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=205, Percent_Identity=63.4146341463415, Blast_Score=279, Evalue=1e-76, Organism=Escherichia coli, GI1786534, Length=197, Percent_Identity=30.9644670050761, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324292, Length=203, Percent_Identity=29.064039408867, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 24581; Mature: 24450
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIKQLFENNSKWSEEIRSQRPEYFTTLEEGQSPGFLWIGCSDSRVPAERLTGLYSGEL CCHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCEE FVHRNVANQVVHTDLNCLSVVQYAVDVLKVKHVIVCGHYGCGGVNAAIDNPKLGLINNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHH LHIRDNYLKYRKQIESLPREQWGDKLCEINVAEQVYNLGNSTIMQSAWERGQDIEIHGVV HHHHHHHHHHHHHHHHCCHHHHCCHHEEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEE YGIGNGKLQDLGVRCSSNDTLENSHLAALDKILSSPILG EECCCCCEEECCEEECCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PEIKQLFENNSKWSEEIRSQRPEYFTTLEEGQSPGFLWIGCSDSRVPAERLTGLYSGEL CHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCEE FVHRNVANQVVHTDLNCLSVVQYAVDVLKVKHVIVCGHYGCGGVNAAIDNPKLGLINNWL EEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHH LHIRDNYLKYRKQIESLPREQWGDKLCEINVAEQVYNLGNSTIMQSAWERGQDIEIHGVV HHHHHHHHHHHHHHHHCCHHHHCCHHEEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEE YGIGNGKLQDLGVRCSSNDTLENSHLAALDKILSSPILG EECCCCCEEECCEEECCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]