| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fbpB2 [H]
Identifier: 218710478
GI number: 218710478
Start: 2701722
End: 2703347
Strand: Reverse
Name: fbpB2 [H]
Synonym: VS_2517
Alternate gene names: 218710478
Gene position: 2703347-2701722 (Counterclockwise)
Preceding gene: 218710479
Following gene: 218710477
Centisome position: 81.94
GC content: 43.3
Gene sequence:
>1626_bases ATGAAAGAAAAGAATTATTTATGGAACACCAGTAGCTGCATCATTGCTGTATTGCTGGTTTTACCGATTTTAGCGATTTT TACGACTGCTGTTGGAGAAACTGATGAGCTATTTTCTCATCTTATGTCCACAGTAATGCCCACCTATACTTATAATACGG TGGTTTTAGTCATAGGAACCTTATTCCTGTCTTTGGCTTTTGGTATTCCGTCAGCTTGGATTATGGCAATGTGCCGTGTT CCAGGAGAGCGCGTTTTACAGTGGGCGTTAGTGCTGCCATTAGCAATGCCAGGCTATATTGTCGGGTATATCTTTACCGA TTGGTTCGACTTTGCAGGTCCTGTTCAAATTCTGCTACGAGATTTAACAGGTTGGGGGCCCGGAGAGTACTGGTTCCCAG ACATTAGAACCTTGTTCGGAGCTATTATTGTTCTGTCACTTGTTCTCTACCCCTATGTTTATTTGCTATGCCGCGCGGCT TTTATGGAGCAAAACGTCTCCTTATTGCAATCCGCTCGGTTGTTAAAGTGTTCACCTTGGGAAAGCTTTCGTCGTATTTC CTTGCCGCTTGTTCGTCCATCAATGGCGGTCGGGCTATCACTGGTTGCAATGGAAACCATTGGTGACTTTGGTACCGTAA GTTACTTTGCAGTCAATACCTTAACGACTGCGGTTTACGATACTTGGTTAGGTTACTCAAGCTTAACGGCTGCTGCGAAA ATATCGGCGATTATGCTGATTATCGTGATCCTACTATTGAGTTCAGAGCGCTATAGCCGTCGCAAACAGAAATTATTCCA GAATCAATTCAGTAGTCGTGAAGATTTTCGTTACGACCTTTCCGGTTGGAAGAAGTGGTTAGCATTGTTTTGGTGTTGGG GGTTGGTGTGTGTCGCATTCTTGTTCCCTCTTGCCCAGTTAATGATTTATGCCTACAAATATTTTGCTCAAAGCTGGACC CCTGAATTTAGAGAGTATGCCGTTAATAGCCTTTATGTTTCGGTAGTTGCTGCAATTATTGGTGTCGTTATTGCTTTGAT TGTGAACTTCAATCAACGTGTTAGCCCAAGTAAGAAAAATCAGGCTTATATGCGTATCGCTTCCATGGGCTATGCCGTTC CAGGCACCGTGTTAGCCATTGGTGTGATGGTCCCAGTTTTGTTTATGGATCATTTAGTCAACGACATTGCAAAAGTGATG GAATGGACAGGACCAGGTTTGATCTTCTCTGGTTCTATGTTTGCACTTATCTTTGCCATGGTCGTGCGTTTTTCAGCGGT TGCAATTGGCAGCATTGAAAGTAGCTTGAGTAAAGTTTCTCCTTCATTGGATATGGCATCTAAAACAATGGGCTGCAATA CCAACCAGATGTTACGTCGTGTTCATTTACCTTTGATTAAACGAGGCGCATTGATCGCCGGATTATTGGTGTTTATCGAA TCAATGAAAGAGTTGAATGCGGCATTGTTGCTGCGTCCTTTTAATTTCGAAACGCTCGCGACTTATGTTTATAACTATGC GTCAGATGAGCACCTTGAATTAGCAGCCATGCCTGCTGTGTTGTTAGTCTTGGTGGGTTTAATTCCGCTGATCATCGTAA ACCGTTCCTTGGAGCAGAAACACTAA
Upstream 100 bases:
>100_bases GTCATTACAGTATATGGGTATAAATAACCCCCCATTAAAAGGATATGAGATGTATTTGCAAATGCATTTGTGTTTCATTA AGCCTCGTTGTAGTTAGGCG
Downstream 100 bases:
>100_bases TGAGTTGTGCATTATCAATTAAAGATCTGACTTGTAAGTACGAGTCCCAAACTATTTTGGAATCTCTTTCTTTAGAAGTT GAGCATGGTGAAATTGTTTG
Product: iron(III) ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH
Sequences:
>Translated_541_residues MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH >Mature_541_residues MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=288, Percent_Identity=25, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60522; Mature: 60522
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LFLSLAFGIPSAWIMAMCRVPGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLR HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAAFMEQNVSLLQSARLLKCSPW HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFPLAQLMIYAYKYFAQSWTPEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVMEWTGPGLIFSGSMFALIFAM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH VVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQK HHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC H C >Mature Secondary Structure MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH LFLSLAFGIPSAWIMAMCRVPGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLR HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAAFMEQNVSLLQSARLLKCSPW HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFPLAQLMIYAYKYFAQSWTPEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVMEWTGPGLIFSGSMFALIFAM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH VVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQK HHHHHHHHHEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]