Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is fbpB2 [H]

Identifier: 218710478

GI number: 218710478

Start: 2701722

End: 2703347

Strand: Reverse

Name: fbpB2 [H]

Synonym: VS_2517

Alternate gene names: 218710478

Gene position: 2703347-2701722 (Counterclockwise)

Preceding gene: 218710479

Following gene: 218710477

Centisome position: 81.94

GC content: 43.3

Gene sequence:

>1626_bases
ATGAAAGAAAAGAATTATTTATGGAACACCAGTAGCTGCATCATTGCTGTATTGCTGGTTTTACCGATTTTAGCGATTTT
TACGACTGCTGTTGGAGAAACTGATGAGCTATTTTCTCATCTTATGTCCACAGTAATGCCCACCTATACTTATAATACGG
TGGTTTTAGTCATAGGAACCTTATTCCTGTCTTTGGCTTTTGGTATTCCGTCAGCTTGGATTATGGCAATGTGCCGTGTT
CCAGGAGAGCGCGTTTTACAGTGGGCGTTAGTGCTGCCATTAGCAATGCCAGGCTATATTGTCGGGTATATCTTTACCGA
TTGGTTCGACTTTGCAGGTCCTGTTCAAATTCTGCTACGAGATTTAACAGGTTGGGGGCCCGGAGAGTACTGGTTCCCAG
ACATTAGAACCTTGTTCGGAGCTATTATTGTTCTGTCACTTGTTCTCTACCCCTATGTTTATTTGCTATGCCGCGCGGCT
TTTATGGAGCAAAACGTCTCCTTATTGCAATCCGCTCGGTTGTTAAAGTGTTCACCTTGGGAAAGCTTTCGTCGTATTTC
CTTGCCGCTTGTTCGTCCATCAATGGCGGTCGGGCTATCACTGGTTGCAATGGAAACCATTGGTGACTTTGGTACCGTAA
GTTACTTTGCAGTCAATACCTTAACGACTGCGGTTTACGATACTTGGTTAGGTTACTCAAGCTTAACGGCTGCTGCGAAA
ATATCGGCGATTATGCTGATTATCGTGATCCTACTATTGAGTTCAGAGCGCTATAGCCGTCGCAAACAGAAATTATTCCA
GAATCAATTCAGTAGTCGTGAAGATTTTCGTTACGACCTTTCCGGTTGGAAGAAGTGGTTAGCATTGTTTTGGTGTTGGG
GGTTGGTGTGTGTCGCATTCTTGTTCCCTCTTGCCCAGTTAATGATTTATGCCTACAAATATTTTGCTCAAAGCTGGACC
CCTGAATTTAGAGAGTATGCCGTTAATAGCCTTTATGTTTCGGTAGTTGCTGCAATTATTGGTGTCGTTATTGCTTTGAT
TGTGAACTTCAATCAACGTGTTAGCCCAAGTAAGAAAAATCAGGCTTATATGCGTATCGCTTCCATGGGCTATGCCGTTC
CAGGCACCGTGTTAGCCATTGGTGTGATGGTCCCAGTTTTGTTTATGGATCATTTAGTCAACGACATTGCAAAAGTGATG
GAATGGACAGGACCAGGTTTGATCTTCTCTGGTTCTATGTTTGCACTTATCTTTGCCATGGTCGTGCGTTTTTCAGCGGT
TGCAATTGGCAGCATTGAAAGTAGCTTGAGTAAAGTTTCTCCTTCATTGGATATGGCATCTAAAACAATGGGCTGCAATA
CCAACCAGATGTTACGTCGTGTTCATTTACCTTTGATTAAACGAGGCGCATTGATCGCCGGATTATTGGTGTTTATCGAA
TCAATGAAAGAGTTGAATGCGGCATTGTTGCTGCGTCCTTTTAATTTCGAAACGCTCGCGACTTATGTTTATAACTATGC
GTCAGATGAGCACCTTGAATTAGCAGCCATGCCTGCTGTGTTGTTAGTCTTGGTGGGTTTAATTCCGCTGATCATCGTAA
ACCGTTCCTTGGAGCAGAAACACTAA

Upstream 100 bases:

>100_bases
GTCATTACAGTATATGGGTATAAATAACCCCCCATTAAAAGGATATGAGATGTATTTGCAAATGCATTTGTGTTTCATTA
AGCCTCGTTGTAGTTAGGCG

Downstream 100 bases:

>100_bases
TGAGTTGTGCATTATCAATTAAAGATCTGACTTGTAAGTACGAGTCCCAAACTATTTTGGAATCTCTTTCTTTAGAAGTT
GAGCATGGTGAAATTGTTTG

Product: iron(III) ABC transporter permease

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV
PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA
FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK
ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT
PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM
EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE
SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH

Sequences:

>Translated_541_residues
MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV
PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA
FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK
ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT
PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM
EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE
SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH
>Mature_541_residues
MKEKNYLWNTSSCIIAVLLVLPILAIFTTAVGETDELFSHLMSTVMPTYTYNTVVLVIGTLFLSLAFGIPSAWIMAMCRV
PGERVLQWALVLPLAMPGYIVGYIFTDWFDFAGPVQILLRDLTGWGPGEYWFPDIRTLFGAIIVLSLVLYPYVYLLCRAA
FMEQNVSLLQSARLLKCSPWESFRRISLPLVRPSMAVGLSLVAMETIGDFGTVSYFAVNTLTTAVYDTWLGYSSLTAAAK
ISAIMLIIVILLLSSERYSRRKQKLFQNQFSSREDFRYDLSGWKKWLALFWCWGLVCVAFLFPLAQLMIYAYKYFAQSWT
PEFREYAVNSLYVSVVAAIIGVVIALIVNFNQRVSPSKKNQAYMRIASMGYAVPGTVLAIGVMVPVLFMDHLVNDIAKVM
EWTGPGLIFSGSMFALIFAMVVRFSAVAIGSIESSLSKVSPSLDMASKTMGCNTNQMLRRVHLPLIKRGALIAGLLVFIE
SMKELNAALLLRPFNFETLATYVYNYASDEHLELAAMPAVLLVLVGLIPLIIVNRSLEQKH

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI87082099, Length=288, Percent_Identity=25, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60522; Mature: 60522

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717 [H]