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The map label for this gene is rsmC [H]

Identifier: 218710465

GI number: 218710465

Start: 2680561

End: 2681583

Strand: Direct

Name: rsmC [H]

Synonym: VS_2504

Alternate gene names: 218710465

Gene position: 2680561-2681583 (Clockwise)

Preceding gene: 218710464

Following gene: 218710466

Centisome position: 81.25

GC content: 44.57

Gene sequence:

>1023_bases
ATGTCAGCTTATATTGCCCCAAGCCAAATTGCTGAGCGCCAACTTGCCTACTTTGAAGGCAAACATGTTTTAGTTGCCGG
TGAGGCTGAAGACTTATTCCCTGTTGAATTAGCGAAACATTGTGAATCAGTCACCGTGTTTACTTCTAATTACAGCTACT
ACCGTCAATTAGAAGGCTACAACACCATCCAACGTTTTTATGGTGCGGAGTTTACCGAAGAGACCAAAGCCGATTTAGTG
ATGCTGTACTGGCCAAAGGCCAAAGCGGAAGCGGAATTTCTGCTGGCGATGTTATTTGCCAAGCTAGGTAAAGATACCGA
GATTGTCGTAGTTGGCGAAAATCGTTCAGGTGTTAAAAGTATCGAGAAAATGTTCGCTCCTTACGGCAAAGTCGTGAAAT
ACGACTCAGCGCGTCGTTGTTCTTTCTACTGGGGTCAATGCTTCGAGCAACCACCAGCCTTCAACCTGCAAGAGTGGTTT
AAAACCTACACGGTTAACATTGGTGAGCAATCACTAACCGTGAAAAGCCTTCCAGGCGTCTTCAGTCATGGTCAGTTTGA
TGTAGGTAGCCAACTATTACTTGATACCCTGCCAAAACTAAAAGGTAAAGTACTGGATTTCGGTTGTGGTGCAGGCGTAT
TGGGCGCAGTAATGGCATCTCGCCACCCTGATATCGAACTGGAAATGTGCGACATCAGTGCATTTGCCGTGGCGTCTAGC
CAAGCAACGCTAGAAGCGAATGGTTTAACAGGTAATGTCTTCGCCTCAGATGTCTACTCTGACACATCAAAAGATTACCA
ATTCATCATCAGTAACCCACCATTCCATTCTGGTTTGGATACAAGCTACAGTGCGACTGAAACCTTACTTGCTCAGGCTC
CTAACCACATGAAGCGTTCTGGTGAGATGATTATTGTTGCGAACAGTTTTTTAAAATACATTCCAATTATTGAGCAAGCT
TTTGGAAAATGCGCGACTCTAAATAAGACCACCAAATTCGCGATCTATCACGCAAGCAAATAG

Upstream 100 bases:

>100_bases
AGCAACTTGGTTGCCGAACCCGTATTAAACACTTCAAGCTTTGGGCGGATTATGCGAAAATCCGCCCTCATTTTTTGCTA
ACGATTCAATAGAGTGTCCT

Downstream 100 bases:

>100_bases
CCTACCTAACACAGCGCAGGGTCAATATCTGCGCTGTCTGTTCATATTTCTATCAAAAGCCCATAAAAATGAGCTTTTGC
ACACGCTTTAAATACCACTT

Product: 16S RNA methylase RsmC

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSAYIAPSQIAERQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGYNTIQRFYGAEFTEETKADLV
MLYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKSIEKMFAPYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWF
KTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASS
QATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAQAPNHMKRSGEMIIVANSFLKYIPIIEQA
FGKCATLNKTTKFAIYHASK

Sequences:

>Translated_340_residues
MSAYIAPSQIAERQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGYNTIQRFYGAEFTEETKADLV
MLYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKSIEKMFAPYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWF
KTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASS
QATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAQAPNHMKRSGEMIIVANSFLKYIPIIEQA
FGKCATLNKTTKFAIYHASK
>Mature_339_residues
SAYIAPSQIAERQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGYNTIQRFYGAEFTEETKADLVM
LYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKSIEKMFAPYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWFK
TYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASSQ
ATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAQAPNHMKRSGEMIIVANSFLKYIPIIEQAF
GKCATLNKTTKFAIYHASK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=347, Percent_Identity=43.5158501440922, Blast_Score=271, Evalue=4e-74,
Organism=Escherichia coli, GI87082206, Length=274, Percent_Identity=27.3722627737226, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37694; Mature: 37563

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYIAPSQIAERQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGY
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCHHHHHHCCH
NTIQRFYGAEFTEETKADLVMLYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKS
HHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
IEKMFAPYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWFKTYTVNIGEQSLTVKSLPGV
HHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHEEEECCCCEEEEECCCCC
FSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASS
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEECCEEEEEECC
QATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAQAPNHMKRS
CCEEEECCCCCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHC
GEMIIVANSFLKYIPIIEQAFGKCATLNKTTKFAIYHASK
CCEEEEECHHHHHHHHHHHHHCCCEECCCCEEEEEEECCC
>Mature Secondary Structure 
SAYIAPSQIAERQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGY
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCHHHHHHCCH
NTIQRFYGAEFTEETKADLVMLYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKS
HHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
IEKMFAPYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWFKTYTVNIGEQSLTVKSLPGV
HHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHEEEECCCCEEEEECCCCC
FSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASS
CCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCEEEEECCEEEEEECC
QATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAQAPNHMKRS
CCEEEECCCCCCEEHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHC
GEMIIVANSFLKYIPIIEQAFGKCATLNKTTKFAIYHASK
CCEEEEECHHHHHHHHHHHHHCCCEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA