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The map label for this gene is rimP

Identifier: 218710447

GI number: 218710447

Start: 2657789

End: 2658244

Strand: Reverse

Name: rimP

Synonym: VS_2484

Alternate gene names: 218710447

Gene position: 2658244-2657789 (Counterclockwise)

Preceding gene: 218710448

Following gene: 218710446

Centisome position: 80.57

GC content: 41.23

Gene sequence:

>456_bases
ATGACTGGTTTAGAAAGACAACTTACTGAAATGCTTGACGCTCCAGTAGCAGCATCAGGTTATGAGTTAGTTGGATTAGA
ATTTATTCGTGCTGGTGAGCACTCAACGCTACGCATTTACATCGATTCACCAAATGGTATCAATGTAGATGATTGCTCTG
AAGTTAGTCACCAAGTAAGTGCCGTAATGGACGTTGAAGATCCAATTTCAGTGGCTTATAACCTTGAAGTGTCTTCACCA
GGTTTAGAGAGACCACTGTTCAAAGCTGAGCATTACCAACAATTTATTGGTCACGAGGTAAGCATCGTTTTGAAAATGGC
TGTCGGCAACCGTCGTAAATGGAAAGGTGATATCCAATCTATCGAAGGCGAGACAGTGAAAGTATTGGTTGAAGGACAAG
AAGAAGAATTCGTCCTGAGCAATATTGCGAAAGCTAACCTGATCCCTAAATTTTAG

Upstream 100 bases:

>100_bases
TTTTTTGTTATCTAAGCATTTGTAAATGCATTTAGATGATAATGTTTGCTTGGAATTTAAATTGGGCTTTGAGCCCTTTT
TTTGTTTCTGGAGTGGTTAA

Downstream 100 bases:

>100_bases
TTCTCCTAGAGAGAAGAGCTTAAGAGGCTAGATTAATGAACAAAGAAATTTTGGCGGTAGTAGAAGCTGTTTCTAATGAG
AAAGCAGTTCCTCGTGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNGINVDDCSEVSHQVSAVMDVEDPISVAYNLEVSSP
GLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQSIEGETVKVLVEGQEEEFVLSNIAKANLIPKF

Sequences:

>Translated_151_residues
MTGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNGINVDDCSEVSHQVSAVMDVEDPISVAYNLEVSSP
GLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQSIEGETVKVLVEGQEEEFVLSNIAKANLIPKF
>Mature_150_residues
TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNGINVDDCSEVSHQVSAVMDVEDPISVAYNLEVSSPG
LERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQSIEGETVKVLVEGQEEEFVLSNIAKANLIPKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=69.5364238410596, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_VIBSL (B7VJH9)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418068.1
- ProteinModelPortal:   B7VJH9
- SMR:   B7VJH9
- GeneID:   7162021
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2484
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16730; Mature: 16599

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNGINVDDCSEVSHQVS
CCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH
AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS
HHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHC
IEGETVKVLVEGQEEEFVLSNIAKANLIPKF
CCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TGLERQLTEMLDAPVAASGYELVGLEFIRAGEHSTLRIYIDSPNGINVDDCSEVSHQVS
CCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH
AVMDVEDPISVAYNLEVSSPGLERPLFKAEHYQQFIGHEVSIVLKMAVGNRRKWKGDIQS
HHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHC
IEGETVKVLVEGQEEEFVLSNIAKANLIPKF
CCCCEEEEEEECCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA