Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710336

Identifier: 218710336

GI number: 218710336

Start: 2538902

End: 2539228

Strand: Direct

Name: 218710336

Synonym: VS_2372

Alternate gene names: NA

Gene position: 2538902-2539228 (Clockwise)

Preceding gene: 218710335

Following gene: 218710338

Centisome position: 76.95

GC content: 41.9

Gene sequence:

>327_bases
ATGAAAAGACTCGGACTTTTAGCCGTTATCGCAGCCGTATTTACCGCAGGTTGTGCTTCAAATACTCAACAAGATAACTT
CCGTGAAGCCTCTTTTGAGCTGTGTAATACTGAAGTCGATATCTACTCTGTAAGCCATGATGAACGAGTTCGTATCGTCT
GCTCTGACGGCTCTAAATTTGCCTTAAACAGTGAAGATACGCTAGAAATTATGCGCGATATCAACATCGACTATTGTGAT
GGCGAAGGCTTAGGTAAATTCAACGAAAGCCGTCACTACTACTCTTTCAAGTGTAAGTCAGGCACCCTACTTAGCATTAA
AAAGTAG

Upstream 100 bases:

>100_bases
GTCAGCCAACACTCCTTGAATCAAAGCGTGTTGTTGTATAGGCTACTCCAAACAGCATATAAAACTCATCACCAAATTCG
ATGATATCGAAGGACTAACA

Downstream 100 bases:

>100_bases
AAGCGACACAAGAAAGCGATAAAGCAATAAAGGGTTGATGTGAAAGCATTAGCCCTTTTTAGTACCTGCCTTTCTGTATT
CTCAGATAACCTAACTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKRLGLLAVIAAVFTAGCASNTQQDNFREASFELCNTEVDIYSVSHDERVRIVCSDGSKFALNSEDTLEIMRDINIDYCD
GEGLGKFNESRHYYSFKCKSGTLLSIKK

Sequences:

>Translated_108_residues
MKRLGLLAVIAAVFTAGCASNTQQDNFREASFELCNTEVDIYSVSHDERVRIVCSDGSKFALNSEDTLEIMRDINIDYCD
GEGLGKFNESRHYYSFKCKSGTLLSIKK
>Mature_108_residues
MKRLGLLAVIAAVFTAGCASNTQQDNFREASFELCNTEVDIYSVSHDERVRIVCSDGSKFALNSEDTLEIMRDINIDYCD
GEGLGKFNESRHYYSFKCKSGTLLSIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12101; Mature: 12101

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLGLLAVIAAVFTAGCASNTQQDNFREASFELCNTEVDIYSVSHDERVRIVCSDGSKF
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCEEEEEEECCCCEEEEEECCCCEE
ALNSEDTLEIMRDINIDYCDGEGLGKFNESRHYYSFKCKSGTLLSIKK
EECCCHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MKRLGLLAVIAAVFTAGCASNTQQDNFREASFELCNTEVDIYSVSHDERVRIVCSDGSKF
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCEEEEEEECCCCEEEEEECCCCEE
ALNSEDTLEIMRDINIDYCDGEGLGKFNESRHYYSFKCKSGTLLSIKK
EECCCHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA