Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710265

Identifier: 218710265

GI number: 218710265

Start: 2469569

End: 2469901

Strand: Direct

Name: 218710265

Synonym: VS_2298

Alternate gene names: NA

Gene position: 2469569-2469901 (Clockwise)

Preceding gene: 218710264

Following gene: 218710267

Centisome position: 74.85

GC content: 45.95

Gene sequence:

>333_bases
ATGAAAAAGGAATTAGTCGCTTTAGCTATGACAGGCATATTAGGCGGGTGCACGACACCGACAACAGTCCCACATAGCGA
ATCTGACCAAGTACAAATGGATTACCACGGACTGATTGATATCAACAAGTGCGAATATAAAGGGGAAGTCACCGGCAGCG
AAGGCCACTGGTATAGTTACCTGTTTTACCCGAACGACACTCTAATTCAAGGCGCAATGAATGAGCTAAAGTCCAATGCT
ATTGGATTAGGTGCGGACACTGTAATTTTCACACTTCCCCAAGATTTTGCGACTTCCGTAACCATGTTGGGCACCGCTTA
TCGGTGTCGCTAA

Upstream 100 bases:

>100_bases
TGAAACAACATCAAATCACGCCAACAAATTGCCGTGGTTACTATTGATCGCAAGCTGGGTAGGTTTCGCGATTTATTTGA
TGAAATAGCAGGATAAATGT

Downstream 100 bases:

>100_bases
TTCGACTTATCGGTAATCGGTAATCGGTAATCGGTAATCGGTAATCGGTAAGGAGAAGAAAGAAGAAAGAAGAAAGAAGA
AAGCCAGCTTTCGCTGGCTT

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Outermembrane Lipoprotein; Ubiquinone Biosynthesis Protein AarF

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKELVALAMTGILGGCTTPTTVPHSESDQVQMDYHGLIDINKCEYKGEVTGSEGHWYSYLFYPNDTLIQGAMNELKSNA
IGLGADTVIFTLPQDFATSVTMLGTAYRCR

Sequences:

>Translated_110_residues
MKKELVALAMTGILGGCTTPTTVPHSESDQVQMDYHGLIDINKCEYKGEVTGSEGHWYSYLFYPNDTLIQGAMNELKSNA
IGLGADTVIFTLPQDFATSVTMLGTAYRCR
>Mature_110_residues
MKKELVALAMTGILGGCTTPTTVPHSESDQVQMDYHGLIDINKCEYKGEVTGSEGHWYSYLFYPNDTLIQGAMNELKSNA
IGLGADTVIFTLPQDFATSVTMLGTAYRCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12044; Mature: 12044

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKELVALAMTGILGGCTTPTTVPHSESDQVQMDYHGLIDINKCEYKGEVTGSEGHWYSY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEECCCCCEEEE
LFYPNDTLIQGAMNELKSNAIGLGADTVIFTLPQDFATSVTMLGTAYRCR
EEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCEEEECC
>Mature Secondary Structure
MKKELVALAMTGILGGCTTPTTVPHSESDQVQMDYHGLIDINKCEYKGEVTGSEGHWYSY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEECCCCCEEEE
LFYPNDTLIQGAMNELKSNAIGLGADTVIFTLPQDFATSVTMLGTAYRCR
EEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA