| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yeaZ [H]
Identifier: 218710193
GI number: 218710193
Start: 2389033
End: 2389734
Strand: Reverse
Name: yeaZ [H]
Synonym: VS_2225
Alternate gene names: 218710193
Gene position: 2389734-2389033 (Counterclockwise)
Preceding gene: 218710194
Following gene: 218710192
Centisome position: 72.43
GC content: 49.15
Gene sequence:
>702_bases ATGAGCGCGAAAATTCTTGCAGTAGATACCGCAACTGAAAACTGTTCAGTTGCACTAGTAATTGGTGACCAGGTGTTCGC ACGTAGCGAAGAGGCACCTCGAGACCATACGAAAAAAATTCTACCTATGGTTGATGAAGTACTGAAAGAAGCGAATGTTG CTTTAACCGATATCGACGCGATCGCGTTTGGCCAAGGCCCGGGCAGTTTCACGGGTGTACGTATTGGCATTGGTATTGCT CAAGGCTTAGCTTTTGGTGCTGATTTGCCGATGATCGGTGTGTCTACACTGGCAGCGATGGCGCAAGGCAGCTACCGTAA ATTTGGCGAAACTCATGTTGCAACAGCAATTGATGCTCGCATGAGTGAAGTTTACTGGGCTCGTTACAGCCGTGAAGATG ATGGTCGTTGGACTGCGGTCGATGCGGAATGTGTAACGCCTCCAAGCGAATTGGCTGAACAGCTTGAAGCGGACTCCAAC ACATGGGCGAAAGTAGGCACAGGTTGGGAAGCATATGCAGAGCACATGGACACACTAGCGATCAACACCAAAGCGTGTGA AGTGCTATTCCCAGAAGCTCAAGACATGGCGTTCCTTGCTCAATTTGCTTATGCTGAAGGCAAAGCGGTTGCTGCTGAAG AGTCTGAGCCGGTTTACTTACGTGATAAAGTGACTTGGAAAAAACTGCCTGGTCGCGAGTAA
Upstream 100 bases:
>100_bases AAGAATTCTTAGCTAAAGACCATTCAACCGCTGCTGAGTAATTAGCATTGTTGAGCTTAGCCATTATTTTTAGATTAGAT AACGAATATTTGAGACACAA
Downstream 100 bases:
>100_bases ATACGTATTACTTTGGCTCTGCAGTTTATTTTGTAGAGCCGTTATTAAAATTAGGTAATAAATTCTTTAAGCATGGTTTC AATCAACGGCTTACCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSAKILAVDTATENCSVALVIGDQVFARSEEAPRDHTKKILPMVDEVLKEANVALTDIDAIAFGQGPGSFTGVRIGIGIA QGLAFGADLPMIGVSTLAAMAQGSYRKFGETHVATAIDARMSEVYWARYSREDDGRWTAVDAECVTPPSELAEQLEADSN TWAKVGTGWEAYAEHMDTLAINTKACEVLFPEAQDMAFLAQFAYAEGKAVAAEESEPVYLRDKVTWKKLPGRE
Sequences:
>Translated_233_residues MSAKILAVDTATENCSVALVIGDQVFARSEEAPRDHTKKILPMVDEVLKEANVALTDIDAIAFGQGPGSFTGVRIGIGIA QGLAFGADLPMIGVSTLAAMAQGSYRKFGETHVATAIDARMSEVYWARYSREDDGRWTAVDAECVTPPSELAEQLEADSN TWAKVGTGWEAYAEHMDTLAINTKACEVLFPEAQDMAFLAQFAYAEGKAVAAEESEPVYLRDKVTWKKLPGRE >Mature_232_residues SAKILAVDTATENCSVALVIGDQVFARSEEAPRDHTKKILPMVDEVLKEANVALTDIDAIAFGQGPGSFTGVRIGIGIAQ GLAFGADLPMIGVSTLAAMAQGSYRKFGETHVATAIDARMSEVYWARYSREDDGRWTAVDAECVTPPSELAEQLEADSNT WAKVGTGWEAYAEHMDTLAINTKACEVLFPEAQDMAFLAQFAYAEGKAVAAEESEPVYLRDKVTWKKLPGRE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=230, Percent_Identity=55.6521739130435, Blast_Score=259, Evalue=7e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25183; Mature: 25051
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKILAVDTATENCSVALVIGDQVFARSEEAPRDHTKKILPMVDEVLKEANVALTDIDA CCCEEEEEECCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCE IAFGQGPGSFTGVRIGIGIAQGLAFGADLPMIGVSTLAAMAQGSYRKFGETHVATAIDAR EEECCCCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH MSEVYWARYSREDDGRWTAVDAECVTPPSELAEQLEADSNTWAKVGTGWEAYAEHMDTLA HHHHHHHHCCCCCCCCEEEECCHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHEE INTKACEVLFPEAQDMAFLAQFAYAEGKAVAAEESEPVYLRDKVTWKKLPGRE ECCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure SAKILAVDTATENCSVALVIGDQVFARSEEAPRDHTKKILPMVDEVLKEANVALTDIDA CCEEEEEECCCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCE IAFGQGPGSFTGVRIGIGIAQGLAFGADLPMIGVSTLAAMAQGSYRKFGETHVATAIDAR EEECCCCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH MSEVYWARYSREDDGRWTAVDAECVTPPSELAEQLEADSNTWAKVGTGWEAYAEHMDTLA HHHHHHHHCCCCCCCCEEEECCHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHEE INTKACEVLFPEAQDMAFLAQFAYAEGKAVAAEESEPVYLRDKVTWKKLPGRE ECCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]