| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710164
Identifier: 218710164
GI number: 218710164
Start: 2344714
End: 2344884
Strand: Direct
Name: 218710164
Synonym: VS_2194
Alternate gene names: NA
Gene position: 2344714-2344884 (Clockwise)
Preceding gene: 218710163
Following gene: 218710165
Centisome position: 71.07
GC content: 45.03
Gene sequence:
>171_bases TTGTATCCGCTGTCTCGTATGCCTGCGCAAACACAAAATACGAGTGGAGAATTGTTTAAAAAGGACATTTATGAAACAGA GCCATTTCTTTGCCCATCTCGCACGCATGAAGCTGATCCAACGCTGGCCTTTGATGCGCTCAGTCTCAAGCGAGAACATT TCAGAACATAG
Upstream 100 bases:
>100_bases ATGAGCACAAAGAAAGATGGCTACAATTTGCTGTTTTAAAAGACTTTAACTTGTATTCATTCACTTCTATGCTTAAAAGG CTCCTGTTTAGGAGCCTTTT
Downstream 100 bases:
>100_bases CCTACAGGTTGCTTTCGTGGCACACGCCTTGGCGCTTATCAAAAACAAGAAGTTTGATGGCAAACTCAACCCAGAACACA TTGCTCTGCTTGGCATGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MYPLSRMPAQTQNTSGELFKKDIYETEPFLCPSRTHEADPTLAFDALSLKREHFRT
Sequences:
>Translated_56_residues MYPLSRMPAQTQNTSGELFKKDIYETEPFLCPSRTHEADPTLAFDALSLKREHFRT >Mature_56_residues MYPLSRMPAQTQNTSGELFKKDIYETEPFLCPSRTHEADPTLAFDALSLKREHFRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6517; Mature: 6517
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPLSRMPAQTQNTSGELFKKDIYETEPFLCPSRTHEADPTLAFDALSLKREHFRT CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure MYPLSRMPAQTQNTSGELFKKDIYETEPFLCPSRTHEADPTLAFDALSLKREHFRT CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA